RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 LINC00299Q6ZSB3 139 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 XYLT1Q86Y38 959 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 WDR49Q8IV35 697 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 CDKL3Q8IVW4 592 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 BRSK2Q8IWQ3 736 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 HACE1Q8IYU2 909 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ANKFN1Q8N957 763 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 SCAIQ8N9R8 606 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 MINDY2Q8NBR6 621 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF280CQ8ND82 737 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TRPM4Q8TD43 1214 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TMIGD2Q96BF3 282 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 EFHD2Q96C19 240 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 C12orf43Q96C57 262 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ACSF2Q96CM8 615 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 GPRASP2Q96D09 838 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ASB9Q96DX5 294 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PLEKHA8Q96JA3 519 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 AGAP3Q96P47 875 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TUBA1CQ9BQE3 449 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 RPAP3Q9H6T3 665 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 COQ10BQ9H8M1 238 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 MRM3Q9HC36 420 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 XPNPEP3Q9NQH7 507 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 XPNPEP1Q9NQW7 623 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PXMP2Q9NR77 195 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 SLC38A7Q9NVC3 462 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ARHGEF38Q9NXL2 777 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TMEM216Q9P0N5 145 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 SUCOQ9UBS9 1254 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 MORF4L1Q9UBU8 362 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF214Q9UL59 606 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 RAP2CQ9Y3L5 183 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 AP4S1Q9Y587 144 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PCDHA10Q9Y5I2 948 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 FNDC1Q4ZHG4 1894 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 BOLA2-SMG1P6H3BVE0 249 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PSMD12O00232 456 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 FBP2O00757 339 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TPP1O14773 563 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 APOL1O14791 398 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 AIM2O14862 343 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 HDAC3O15379 428 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 KCNN4O15554 427 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 HTRA2O43464 458 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TRPA1O75762 1119 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ALDOAP04075 364 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 APOA4P06727 396 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 OCM2P0CE71 109 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 OCMP0CE72 109 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PTPRAP18433 802 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 MYF6P23409 242 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 RBL1P28749 1068 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 EPHA3P29320 983 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ARRB2P32121 409 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 GP5P40197 560 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 NUDT2P50583 147 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF143P52747 638 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 CDH6P55285 790 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 WNT7BP56706 349 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 C21orf59P57076 290 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 RPS3AP61247 264 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PSMC1P62191 440 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 GALNT2Q10471 571 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 MTMR1Q13613 665 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TRIM25Q14258 630 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PPP2R5DQ14738 602 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 C16orf72Q14CZ0 275 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 SMTNL2Q2TAL5 461 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TBC1D10BQ4KMP7 808 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 NHSL2Q5HYW2 709 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 KCNT1Q5JUK3 1230 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 INTS11Q5TA45 600 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 LMBRD2Q68DH5 695 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 KRT80Q6KB66 452 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TRMT10BQ6PF06 316 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 NPNTQ6UXI9 565 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 GADL1Q6ZQY3 521 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 CYP4V2Q6ZWL3 525 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 EEPD1Q7L9B9 569 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 LYSMD3Q7Z3D4 306 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 SNX32Q86XE0 403 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 CLVS1Q8IUQ0 354 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 SLC15A3Q8IY34 581 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 GALNT4Q8N4A0 578 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 FIBCD1Q8N539 461 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PLD5Q8N7P1 536 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 GOLM1Q8NBJ4 401 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 BHLHE22Q8NFJ8 381 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TNIP2Q8NFZ5 429 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TBC1D15Q8TC07 691 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 RDH11Q8TC12 318 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 PNPT1Q8TCS8 783 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 HSPH1Q92598 858 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 TFAP2CQ92754 450 aa4.25□□□□□ -1.73
PTP4A1-205ENST00000626021 EME1Q96AY2 570 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms