RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 OR56A4Q8NGH8 313 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 PLD4Q96BZ4 506 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 BTN2A3PQ96KV6 586 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 COPS8Q99627 209 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 CCT7Q99832 543 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 COMMD8Q9NX08 183 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 NCKIPSDQ9NZQ3 722 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 CCDC195A0A1B0GUA6 201 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 TTC26A0AVF1 554 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 SLC28A1O00337 649 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 LDOC1O95751 146 aaPredicted RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 S100GP29377 79 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 STX4Q12846 297 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 LRRC6Q86X45 466 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 SLC22A18Q96BI1 424 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 SFXN1Q9H9B4 322 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 DNAAF2Q9NVR5 837 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 SLC27A5Q9Y2P5 690 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CYTH3O43739 400 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CCNT2O60583 730 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 POP4O95707 220 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 HNF1BP35680 557 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 SERPINB10P48595 397 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 PDPK2PQ6A1A2 396 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 KCNT2Q6UVM3 1135 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 IARS2Q9NSE4 1012 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 OPTCQ9UBM4 332 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CPED1A4D0V7 1026 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 GSTM1P09488 218 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 KITP10721 976 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CMPK1P30085 196 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 SKIV2L2P42285 1042 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 SERPINH1P50454 418 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 STK4Q13043 487 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 MPP3Q13368 585 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 DGKKQ5KSL6 1271 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 AFTPHQ6ULP2 937 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 PARGQ86W56 976 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 FAM20CQ8IXL6 584 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CASKIN2Q8WXE0 1202 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 TRABDQ9H4I3 376 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 ALKBH4Q9NXW9 302 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CYLC2Q14093 348 aaPredicted RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 CSHL1Q14406 222 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 CHSY3Q70JA7 882 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 DENND6AQ8IWF6 608 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 SAMD14Q8IZD0 417 aaPredicted RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 TMEM125Q96AQ2 219 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 PRICKLE1Q96MT3 831 aaPredicted RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 SPATA9Q9BWV2 254 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 TTYH1Q9H313 450 aaPredicted RBP11.26□□□□□ -0.61
VPS8-227ENST00000625842 DUSP12Q9UNI6 340 aa11.26□□□□□ -0.61
VPS8-227ENST00000625842 KIF1AQ12756 1690 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 A0A0B4J269 797 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 A6NCN8 305 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 TTLL8A6PVC2 850 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 H7C0S8 307 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SLC37A4O43826 429 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 CCNB2O95067 398 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 PLEKP08567 350 aaPredicted RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 KCNA5P22460 613 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 ITGADQ13349 1161 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 ALKBH2Q6NS38 261 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 LAYNQ6UX15 382 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 CLIP3Q96DZ5 547 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 FUBP3Q96I24 572 aaKnown RBP eCLIP11.25□□□□□ -0.61
VPS8-227ENST00000625842 ZNF514Q96K75 400 aaPredicted RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 C17orf62Q9BQA9 187 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SAGE1Q9NXZ1 904 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 MTRRQ9UBK8 725 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 TRIM10Q9UDY6 481 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 LZTS1Q9Y250 596 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 MFHAS1Q9Y4C4 1052 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 ZNF780BQ9Y6R6 833 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 LRRIQ1Q96JM4 1722 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 ALADP13716 330 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SDHBP21912 280 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 COMTP21964 271 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 OXTRP30559 389 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 NRIP1P48552 1158 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 YBEYP58557 167 aaPredicted RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 ITPRIPL2Q3MIP1 535 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 INTS11Q5TA45 600 aaKnown RBP11.25□□□□□ -0.61
VPS8-227ENST00000625842 P4HA3Q7Z4N8 544 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 GALNT7Q86SF2 657 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 ANKMY2Q8IV38 441 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 RASGRP3Q8IV61 690 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 NAT16Q8N8M0 369 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 BPIFB1Q8TDL5 484 aa11.25□□□□□ -0.61
VPS8-227ENST00000625842 LPPQ93052 612 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms