RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 STILQ15468 1287 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 DLG2Q15700 870 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 KIAA1614Q5VZ46 1190 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 FOXR1Q6PIV2 292 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 KRBA2Q6ZNG9 492 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 TMEM145Q8NBT3 493 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 TTC9Q92623 222 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 KAT5Q92993 513 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 RNF34Q969K3 372 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 BTN2A3PQ96KV6 586 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 SPATA32Q96LK8 384 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 NT5C1BQ96P26 610 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 TSG101Q99816 390 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 ASCL3Q9NQ33 180 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 NLGN3Q9NZ94 848 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 COX16Q9P0S2 106 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 PPM1HQ9ULR3 514 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 SATB2Q9UPW6 733 aa15.1■□□□□ 0.01
PNKP-218ENST00000625299 KPNA3O00505 521 aaPredicted RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 SLC16A3O15427 465 aaKnown RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 ARHGAP6O43182 974 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 SART1O43290 800 aaKnown RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 NEBLO76041 1014 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 TRUB2O95900 331 aaKnown RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 GIMD1P0DJR0 217 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 RBMS1P29558 406 aaKnown RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 AKT2P31751 481 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 TAS2R38P59533 333 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 CENPCQ03188 943 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 RABGAP1LQ5R372 815 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 CXorf57Q6NSI4 855 aaKnown RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 PRICKLE2Q7Z3G6 844 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 ATP6V0D2Q8N8Y2 350 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 IFI44Q8TCB0 444 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 NOX5Q96PH1 765 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 DPH1Q9BZG8 443 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 FAM204AQ9H8W3 233 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 EVA1BQ9NVM1 165 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 DNAJC28Q9NX36 388 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 ARMCX3Q9UH62 379 aaPredicted RBP15.09■□□□□ 0.01
PNKP-218ENST00000625299 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
PNKP-218ENST00000625299 TCAF2A6NFQ2 919 aa15.08■□□□□ 0
PNKP-218ENST00000625299 NEMP2A6NFY4 417 aa15.08■□□□□ 0
PNKP-218ENST00000625299 KCNU1A8MYU2 1149 aa15.08■□□□□ 0
PNKP-218ENST00000625299 MCF2LO15068 1137 aa15.08■□□□□ 0
PNKP-218ENST00000625299 ALOX15BO15296 676 aa15.08■□□□□ 0
PNKP-218ENST00000625299 ATP9BO43861 1147 aa15.08■□□□□ 0
PNKP-218ENST00000625299 GP1BAP07359 652 aa15.08■□□□□ 0
PNKP-218ENST00000625299 HNRNPA2B1P22626 353 aaKnown RBP15.08■□□□□ 0
PNKP-218ENST00000625299 DUSP3P51452 185 aaPredicted RBP15.08■□□□□ 0
PNKP-218ENST00000625299 PITX1P78337 314 aaPredicted RBP15.08■□□□□ 0
PNKP-218ENST00000625299 PIP5KL1Q5T9C9 394 aa15.08■□□□□ 0
PNKP-218ENST00000625299 TTC39BQ5VTQ0 682 aaPredicted RBP15.08■□□□□ 0
PNKP-218ENST00000625299 OR6B2Q6IFH4 312 aa15.08■□□□□ 0
PNKP-218ENST00000625299 CRTC1Q6UUV9 634 aa15.08■□□□□ 0
PNKP-218ENST00000625299 SLC22A18ASQ8N1D0 253 aa15.08■□□□□ 0
PNKP-218ENST00000625299 SLC35C1Q96A29 364 aa15.08■□□□□ 0
PNKP-218ENST00000625299 MED8Q96G25 268 aa15.08■□□□□ 0
PNKP-218ENST00000625299 ATXN7L3BQ96GX2 97 aa15.08■□□□□ 0
PNKP-218ENST00000625299 RPRD1AQ96P16 312 aaPredicted RBP15.08■□□□□ 0
PNKP-218ENST00000625299 TRIM62Q9BVG3 475 aa15.08■□□□□ 0
PNKP-218ENST00000625299 DYRK4Q9NR20 520 aa15.08■□□□□ 0
PNKP-218ENST00000625299 VPS28Q9UK41 221 aa15.08■□□□□ 0
PNKP-218ENST00000625299 PIEZO2Q9H5I5 2752 aa15.08■□□□□ 0
PNKP-218ENST00000625299 LY6G6EA0A0G2JKS1 128 aa15.07■□□□□ 0
PNKP-218ENST00000625299 CPED1A4D0V7 1026 aa15.07■□□□□ 0
PNKP-218ENST00000625299 K7ESM1 405 aa15.07■□□□□ 0
PNKP-218ENST00000625299 PCDH8O95206 1070 aa15.07■□□□□ 0
PNKP-218ENST00000625299 TGM2P21980 687 aa15.07■□□□□ 0
PNKP-218ENST00000625299 GGCXP38435 758 aa15.07■□□□□ 0
PNKP-218ENST00000625299 PRCPP42785 496 aa15.07■□□□□ 0
PNKP-218ENST00000625299 FMO5P49326 533 aa15.07■□□□□ 0
PNKP-218ENST00000625299 IRAK1P51617 712 aa15.07■□□□□ 0
PNKP-218ENST00000625299 PLK1P53350 603 aa15.07■□□□□ 0
PNKP-218ENST00000625299 OXCT1P55809 520 aa15.07■□□□□ 0
PNKP-218ENST00000625299 FKBP3Q00688 224 aaKnown RBP15.07■□□□□ 0
PNKP-218ENST00000625299 CDKN3Q16667 212 aa15.07■□□□□ 0
PNKP-218ENST00000625299 ISXQ2M1V0 245 aa15.07■□□□□ 0
PNKP-218ENST00000625299 ZNF284Q2VY69 593 aa15.07■□□□□ 0
PNKP-218ENST00000625299 DENND1BQ6P3S1 775 aa15.07■□□□□ 0
PNKP-218ENST00000625299 GCNT7Q6ZNI0 430 aa15.07■□□□□ 0
PNKP-218ENST00000625299 Q6ZSR6 202 aa15.07■□□□□ 0
PNKP-218ENST00000625299 RRAGAQ7L523 313 aa15.07■□□□□ 0
PNKP-218ENST00000625299 HORMAD1Q86X24 394 aa15.07■□□□□ 0
PNKP-218ENST00000625299 SH2D3CQ8N5H7 860 aa15.07■□□□□ 0
PNKP-218ENST00000625299 OR52K2Q8NGK3 314 aa15.07■□□□□ 0
PNKP-218ENST00000625299 ARRDC3Q96B67 414 aa15.07■□□□□ 0
PNKP-218ENST00000625299 PPP1R9BQ96SB3 815 aa15.07■□□□□ 0
PNKP-218ENST00000625299 PRMT1Q99873 361 aaKnown RBP15.07■□□□□ 0
PNKP-218ENST00000625299 DUSP23Q9BVJ7 150 aa15.07■□□□□ 0
PNKP-218ENST00000625299 POPDC2Q9HBU9 364 aa15.07■□□□□ 0
PNKP-218ENST00000625299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.07■□□□□ 0
PNKP-218ENST00000625299 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
PNKP-218ENST00000625299 U3KQA8 63 aa15.07■□□□□ 0
PNKP-218ENST00000625299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.06■□□□□ 0
PNKP-218ENST00000625299 TRIM49BA6NDI0 452 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms