RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 COMTP21964 271 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 RFC1P35251 1148 aaPredicted RBP13.01□□□□□ -0.33
PNKP-217ENST00000625216 MATKP42679 507 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 DNA2P51530 1060 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 TPMTP51580 245 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 PTPRNQ16849 979 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 PPM1JQ5JR12 505 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 WDR45BQ5MNZ6 344 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 RABGAP1LQ5R372 815 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 ACBD5Q5T8D3 534 aaPredicted RBP13.01□□□□□ -0.33
PNKP-217ENST00000625216 TTC39BQ5VTQ0 682 aaPredicted RBP13.01□□□□□ -0.33
PNKP-217ENST00000625216 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 DCUN1D2Q6PH85 259 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 LGI2Q8N0V4 545 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 CARNMT1Q8N4J0 409 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 WFDC5Q8TCV5 224 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 CYB5D2Q8WUJ1 264 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 TOE1Q96GM8 510 aaKnown RBP13.01□□□□□ -0.33
PNKP-217ENST00000625216 PCED1AQ9H1Q7 454 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 SLC6A17Q9H1V8 727 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 SUSD2Q9UGT4 822 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 SNX12Q9UMY4 172 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
PNKP-217ENST00000625216 NCOR2Q9Y618 2525 aa13□□□□□ -0.33
PNKP-217ENST00000625216 PATE3B3GLJ2 98 aa13□□□□□ -0.33
PNKP-217ENST00000625216 MYO1FO00160 1098 aa13□□□□□ -0.33
PNKP-217ENST00000625216 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
PNKP-217ENST00000625216 SRGAP2O75044 1071 aa13□□□□□ -0.33
PNKP-217ENST00000625216 GRAP2O75791 330 aa13□□□□□ -0.33
PNKP-217ENST00000625216 F9P00740 461 aa13□□□□□ -0.33
PNKP-217ENST00000625216 SRPRAP08240 638 aaKnown RBP13□□□□□ -0.33
PNKP-217ENST00000625216 SERPINF2P08697 491 aa13□□□□□ -0.33
PNKP-217ENST00000625216 KRT3P12035 628 aa13□□□□□ -0.33
PNKP-217ENST00000625216 HLA-EP13747 358 aa13□□□□□ -0.33
PNKP-217ENST00000625216 GNSP15586 552 aa13□□□□□ -0.33
PNKP-217ENST00000625216 FLT3P36888 993 aa13□□□□□ -0.33
PNKP-217ENST00000625216 CSKP41240 450 aa13□□□□□ -0.33
PNKP-217ENST00000625216 MARCKSL1P49006 195 aa13□□□□□ -0.33
PNKP-217ENST00000625216 PITX1P78337 314 aaPredicted RBP13□□□□□ -0.33
PNKP-217ENST00000625216 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
PNKP-217ENST00000625216 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
PNKP-217ENST00000625216 CFAP52Q8N1V2 620 aa13□□□□□ -0.33
PNKP-217ENST00000625216 DEFB119Q8N690 84 aa13□□□□□ -0.33
PNKP-217ENST00000625216 DNASE2BQ8WZ79 361 aa13□□□□□ -0.33
PNKP-217ENST00000625216 KRT35Q92764 455 aa13□□□□□ -0.33
PNKP-217ENST00000625216 ERLEC1Q96DZ1 483 aa13□□□□□ -0.33
PNKP-217ENST00000625216 MYEOVQ96EZ4 313 aa13□□□□□ -0.33
PNKP-217ENST00000625216 HES6Q96HZ4 224 aa13□□□□□ -0.33
PNKP-217ENST00000625216 HSPA12BQ96MM6 686 aa13□□□□□ -0.33
PNKP-217ENST00000625216 PSMB7Q99436 277 aa13□□□□□ -0.33
PNKP-217ENST00000625216 PRMT1Q99873 361 aaKnown RBP13□□□□□ -0.33
PNKP-217ENST00000625216 L2HGDHQ9H9P8 463 aa13□□□□□ -0.33
PNKP-217ENST00000625216 PRSS16Q9NQE7 514 aa13□□□□□ -0.33
PNKP-217ENST00000625216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13□□□□□ -0.33
PNKP-217ENST00000625216 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
PNKP-217ENST00000625216 INTS6Q9UL03 887 aaKnown RBP13□□□□□ -0.33
PNKP-217ENST00000625216 STAP1Q9ULZ2 295 aa13□□□□□ -0.33
PNKP-217ENST00000625216 RALGAPA1Q6GYQ0 2036 aa13□□□□□ -0.33
PNKP-217ENST00000625216 A0A1B0GVM2 712 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 TCAF2A6NFQ2 919 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 C2CD4BA6NLJ0 364 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 M0QYT0 321 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 ADRB1P08588 477 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 MAN1A1P33908 653 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 NNMTP40261 264 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 PLK1P53350 603 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 ECT2LQ008S8 904 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 SULT2A1Q06520 285 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 NME3Q13232 169 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 RPS6KA1Q15418 735 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 HNRNPA1L2Q32P51 320 aaKnown RBP12.99□□□□□ -0.33
PNKP-217ENST00000625216 FSCBQ5H9T9 825 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 PITRM1Q5JRX3 1037 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 BRMS1LQ5PSV4 323 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 SND1Q7KZF4 910 aaKnown RBP eCLIP12.99□□□□□ -0.33
PNKP-217ENST00000625216 ARCQ7LC44 396 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 RGL4Q8IZJ4 473 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 NIPA2Q8N8Q9 360 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 FNIP1Q8TF40 1166 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 COG1Q8WTW3 980 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 NT5C3BQ969T7 300 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 PGAP3Q96FM1 320 aaPredicted RBP12.99□□□□□ -0.33
PNKP-217ENST00000625216 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 NPY6RQ99463 290 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 GPR174Q9BXC1 333 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 WDCPQ9H6R7 721 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 CAPN10Q9HC96 672 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 SCML1Q9UN30 329 aa12.99□□□□□ -0.33
PNKP-217ENST00000625216 SYNJ2BP-COX16A0A087WUM0 186 aa12.98□□□□□ -0.33
PNKP-217ENST00000625216 TARSL2A2RTX5 802 aaKnown RBP12.98□□□□□ -0.33
PNKP-217ENST00000625216 METTL12A8MUP2 240 aa12.98□□□□□ -0.33
PNKP-217ENST00000625216 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
PNKP-217ENST00000625216 ZNF185O15231 689 aa12.98□□□□□ -0.33
PNKP-217ENST00000625216 SPOPO43791 374 aa12.98□□□□□ -0.33
PNKP-217ENST00000625216 RNASEH1O60930 286 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms