RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 KLHL25Q9H0H3 589 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 GMPR2Q9P2T1 348 aaKnown RBP15.46■□□□□ 0.06
PMS1-221ENST00000624204 VPS51Q9UID3 782 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 CDYLQ9Y232 598 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 CENPFP49454 3210 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 E7ENX8 843 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 MCCD1P59942 119 aaPredicted RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 GLRA4Q5JXX5 417 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 SWSAP1Q6NVH7 229 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 XYLT1Q86Y38 959 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 CBR4Q8N4T8 237 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 HPS1Q92902 700 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 GLIS2Q9BZE0 524 aaPredicted RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 GIN1Q9NXP7 522 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 ARHGAP28Q9P2N2 729 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 CCNL1Q9UK58 526 aaPredicted RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 ASS1P00966 412 aaKnown RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 JAK1P23458 1154 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 GARSP41250 739 aaKnown RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 SLC7A3Q8WY07 619 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 ASB9Q96DX5 294 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 NDEL1Q9GZM8 345 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 DRC3Q9H069 523 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 ATAD3AQ9NVI7 634 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 SMOXQ9NWM0 555 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 GABRB3P28472 473 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 TNFSF9P41273 254 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 MAPK11Q15759 364 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 ANKRD26P1Q6NSI1 321 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 TMCO5AQ8N6Q1 288 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 MCUQ8NE86 351 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 FAM110BQ8TC76 370 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 SLC39A3Q9BRY0 314 aa15.45■□□□□ 0.06
PMS1-221ENST00000624204 NPLQ9BXD5 320 aaPredicted RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 DUS2Q9NX74 493 aaKnown RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 CNOT6Q9ULM6 557 aaKnown RBP15.45■□□□□ 0.06
PMS1-221ENST00000624204 A0A096LPK6 155 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 C9IYK1 514 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 TFEBP19484 476 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 PAX3P23760 479 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 IREB2P48200 963 aaKnown RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 RPL14P50914 215 aaKnown RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 JAK3P52333 1124 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 NAGLUP54802 743 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 RHDQ02161 417 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 MOGQ16653 247 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 CCDC153Q494R4 210 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 ARL13AQ5H913 290 aaPredicted RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 DCLRE1AQ6PJP8 1040 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 FNIP1Q8TF40 1166 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 RXFP2Q8WXD0 754 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 APOL2Q9BQE5 337 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 TRIM8Q9BZR9 551 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 MRPL46Q9H2W6 279 aaKnown RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 KRBA1A5PL33 1030 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 BBOX1O75936 387 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 OR6B2Q6IFH4 312 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 IFNEQ86WN2 208 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 MCPH1Q8NEM0 835 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 TAAR1Q96RJ0 339 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 CDCA7Q9BWT1 371 aaPredicted RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
PMS1-221ENST00000624204 FAM49BQ9NUQ9 324 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 VPS28Q9UK41 221 aa15.44■□□□□ 0.06
PMS1-221ENST00000624204 NRP1O14786 923 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 BCL10O95999 233 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 GBE1Q04446 702 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 PRKCQQ04759 706 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 NHSL2Q5HYW2 709 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 KCTD8Q6ZWB6 473 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 PCDH19Q8TAB3 1148 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 ITPKCQ96DU7 683 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 CNDP1Q96KN2 507 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.43■□□□□ 0.06
PMS1-221ENST00000624204 ZBTB26Q9HCK0 441 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 GNPTGQ9UJJ9 305 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 CDH7Q9ULB5 785 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 COPG1Q9Y678 874 aaKnown RBP15.43■□□□□ 0.06
PMS1-221ENST00000624204 DGKBQ9Y6T7 804 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 A6NL46 340 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 TK2O00142 265 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 ZBTB7AO95365 584 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 LDHAP00338 332 aaKnown RBP15.43■□□□□ 0.06
PMS1-221ENST00000624204 GRIA3P42263 894 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 PLCL1Q15111 1095 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 DGKDQ16760 1214 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 HMBOX1Q6NT76 420 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 STARD8Q92502 1023 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 PBXIP1Q96AQ6 731 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 FBXL20Q96IG2 436 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 PIF1Q9H611 641 aa15.43■□□□□ 0.06
PMS1-221ENST00000624204 NCKIPSDQ9NZQ3 722 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms