RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RCN1Q15293 331 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 TRMT5Q32P41 509 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 LINC00523Q86TU6 105 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CNTN4Q8IWV2 1026 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 ULK2Q8IYT8 1036 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CNTD1Q8N815 330 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 HAPLN3Q96S86 360 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 GPR22Q99680 433 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 AGO3Q9H9G7 860 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 CHRAC1Q9NRG0 131 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 DSEQ9UL01 958 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 APOBEC2Q9Y235 224 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 A0A096LPK6 155 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 SIN3BO75182 1162 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 C6orf222P0C671 652 aaPredicted RBP9.61□□□□□ -0.87
PDPN-212ENST00000621990 VHLP40337 213 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 CPA2P48052 419 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 KDSRQ06136 332 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 MPP3Q13368 585 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 DSC3Q14574 896 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 HSP90AA5PQ58FG0 334 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 BRMS1LQ5PSV4 323 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 RASAL3Q86YV0 1011 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ARHGAP12Q8IWW6 846 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 SCUBE1Q8IWY4 988 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 URGCPQ8TCY9 931 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 NRG4Q8WWG1 115 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 STON2Q8WXE9 905 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 TMLHEQ9NVH6 421 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 PNPOQ9NVS9 261 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ZNF358Q9NW07 568 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 INPPL1O15357 1258 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 FGF10O15520 208 aaPredicted RBP9.61□□□□□ -0.87
PDPN-212ENST00000621990 IRAK2O43187 625 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 TBX10O75333 385 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 CYBAP13498 195 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 BDNFP23560 247 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ABL2P42684 1182 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 NUMBP49757 651 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ACTR3P61158 418 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ITGA9Q13797 1035 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 BLMHQ13867 455 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 RCN2Q14257 317 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 PRPSAP1Q14558 356 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 MAPRE1Q15691 268 aaKnown RBP9.61□□□□□ -0.87
PDPN-212ENST00000621990 GNASQ5JWF2 1037 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 AFMIDQ63HM1 303 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 PDPK2PQ6A1A2 396 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 TMEM151AQ8N4L1 468 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 OR10T2Q8NGX3 314 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 RDH11Q8TC12 318 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 AZIN2Q96A70 460 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ZNF419Q96HQ0 510 aaPredicted RBP9.61□□□□□ -0.87
PDPN-212ENST00000621990 VPS39Q96JC1 886 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 IL12RB2Q99665 862 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 C1QTNF1Q9BXJ1 281 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 SMOC2Q9H3U7 446 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 C20orf96Q9NUD7 363 aaPredicted RBP9.61□□□□□ -0.87
PDPN-212ENST00000621990 ZNF212Q9UDV6 495 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 DNAJB4Q9UDY4 337 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 ANKRD6Q9Y2G4 727 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 AAR2Q9Y312 384 aaKnown RBP9.61□□□□□ -0.87
PDPN-212ENST00000621990 CDY1Q9Y6F8 540 aa9.61□□□□□ -0.87
PDPN-212ENST00000621990 NYNRINQ9P2P1 1898 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 A0A0U1RQF3 1178 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 TNFRSF10BO14763 440 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 MGEA5O60502 916 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 JCHAINP01591 159 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 C2P06681 752 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 APOA4P06727 396 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 NMBRP28336 390 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 POLD2P49005 469 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 BTKQ06187 659 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 ARMC3Q5W041 872 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 EPGNQ6UW88 154 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 CXCL17Q6UXB2 119 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 NAPRTQ6XQN6 538 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 LRRTM3Q86VH5 581 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 ZC3HC1Q86WB0 502 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 LZTR1Q8N653 840 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 GPATCH11Q8N954 259 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 DNAJC9Q8WXX5 260 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 STMN2Q93045 179 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 MIEF2Q96C03 454 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 UROC1Q96N76 676 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 PPP1R2P1Q96PQ5 205 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 FCRL5Q96RD9 977 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 NMRAL1Q9HBL8 299 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 NMRK1Q9NWW6 199 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 SLC7A8Q9UHI5 535 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 MYLKQ15746 1914 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 A0A088AWK7 358 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 NVLO15381 856 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 ATP9BO43861 1147 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 MAFKO60675 156 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms