RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 MLH1P40692 756 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 CYP2J2P51589 502 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 ICA1Q05084 483 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 GPS2Q13227 327 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 PDCLQ13371 301 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 DCTN1Q14203 1278 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 GPR18Q14330 331 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 DUSP6Q16828 381 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 SLC4A8Q2Y0W8 1093 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 INO80DQ53TQ3 878 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-229ENST00000621897 VWA5B1Q5TIE3 1220 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 FAM171A1Q5VUB5 890 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 DGAT2L7PQ6IED9 249 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 TMEM71Q6P5X7 295 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 RASGRP2Q7LDG7 609 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 IGFN1Q86VF2 1251 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 CCDC117Q8IWD4 279 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-229ENST00000621897 CPT1BQ92523 772 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 CLPBQ9H078 707 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 ZDHHC7Q9NXF8 308 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 PLK2Q9NYY3 685 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 WWOXQ9NZC7 414 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 PLEKHB1Q9UF11 243 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-229ENST00000621897 KCND3Q9UK17 655 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 MYO6Q9UM54 1294 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 PROCRQ9UNN8 238 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 PRR23D1E9PI22 279 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-229ENST00000621897 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-229ENST00000621897 PRR23D2P0DMB1 279 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-229ENST00000621897 PMS2P54278 862 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 ABATP80404 500 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 ROR2Q01974 943 aaKnown RBP4.78□□□□□ -1.64
BRCA1-229ENST00000621897 C5orf22Q49AR2 442 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 GXYLT1Q4G148 440 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 DCAF12L2Q5VW00 463 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 C1orf228Q6PIY5 440 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 Q6ZSV7 163 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 SCN4BQ8IWT1 228 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 ADHFE1Q8IWW8 467 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 CACNA2D3Q8IZS8 1091 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 CADM3Q8N126 398 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 DPP10Q8N608 796 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 IQCF1Q8N6M8 205 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 VPS37AQ8NEZ2 397 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 POF1BQ8WVV4 589 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 TRAPPC9Q96Q05 1148 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 PIGSQ96S52 555 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 DDX23Q9BUQ8 820 aaKnown RBP4.78□□□□□ -1.64
BRCA1-229ENST00000621897 TRIM31Q9BZY9 425 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 DCLK3Q9C098 648 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 SLCO5A1Q9H2Y9 848 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 PLCB1Q9NQ66 1216 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 NDUFAF4Q9P032 175 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 DAAM1Q9Y4D1 1078 aa4.78□□□□□ -1.64
BRCA1-229ENST00000621897 STMND1H3BQB6 276 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 SPRY3O43610 288 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 FCGR2AP12318 317 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 UNGP13051 313 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 ACP5P13686 325 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 CHN1P15882 459 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 AVPR2P30518 371 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 PPP3CCP48454 512 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 ENTPD1P49961 510 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 LTBQ06643 244 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 Q0VFX4 171 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 ALKBH1Q13686 389 aaKnown RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 ZNF324BQ6AW86 544 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 SPATA2LQ8IUW3 424 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 FAM185AQ8N0U4 392 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 OTUD7AQ8TE49 926 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-229ENST00000621897 APOLD1Q96LR9 279 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 HERC2P3Q9BVR0 1158 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 ACAD9Q9H845 621 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 GRHPRQ9UBQ7 328 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 KLQ9UEF7 1012 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 RAP2CQ9Y3L5 183 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 SLC4A4Q9Y6R1 1079 aa4.77□□□□□ -1.65
BRCA1-229ENST00000621897 OR6C75A6NL08 312 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 F5H423 210 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-229ENST00000621897 H0Y3Z8 333 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 GSTM2P28161 218 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 PCYT1AP49585 367 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 OAZ1P54368 228 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 BLMHQ13867 455 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 UBE4AQ14139 1066 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 FNBP1LQ5T0N5 605 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 TANGO2Q6ICL3 276 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 SYT13Q7L8C5 426 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 HORMAD2Q8N7B1 307 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 PTGR2Q8N8N7 351 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-229ENST00000621897 ADAMTS14Q8WXS8 1223 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 MED30Q96HR3 178 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 KLHL31Q9H511 634 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 HIF1ANQ9NWT6 349 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 TAGLN3Q9UI15 199 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 CDH22Q9UJ99 828 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 BAG5Q9UL15 447 aa4.76□□□□□ -1.65
BRCA1-229ENST00000621897 CLEC18AA5D8T8 446 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms