RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 APBB3O95704 486 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 KRT1P04264 644 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 HLA-EP13747 358 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 GLDCP23378 1020 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 KDELR1P24390 212 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 PARP15Q460N3 678 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 RETSATQ6NUM9 610 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 KIAA1211LQ6NV74 962 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 TMCO3Q6UWJ1 677 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 ZNF366Q8N895 744 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 PRSS33Q8NF86 280 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 MYO19Q96H55 970 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 CELF6Q96J87 481 aaKnown RBP19.01■□□□□ 0.63
CIRBP-245ENST00000621399 ZNF670Q9BS34 389 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 ACE2Q9BYF1 805 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-245ENST00000621399 KCNH6Q9H252 994 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 SUN2Q9UH99 717 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.01■□□□□ 0.63
CIRBP-245ENST00000621399 ARIH1Q9Y4X5 557 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-245ENST00000621399 TCRBV21S2A2A0A5A6 115 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 TTC34A8MYJ7 566 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 H0Y858 1186 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 DCLK1O15075 740 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 SP9P0CG40 484 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 PXNP49023 591 aaPredicted RBP19■□□□□ 0.63
CIRBP-245ENST00000621399 NRLP54845 237 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 CCDC173Q0VFZ6 552 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ZNF528Q3MIS6 628 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ACCSLQ4AC99 568 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ANKRD20A8PQ5CZ79 823 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 HEATR6Q6AI08 1181 aaKnown RBP19■□□□□ 0.63
CIRBP-245ENST00000621399 ANO7Q6IWH7 933 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 LINGO4Q6UY18 593 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 SYCE1Q8N0S2 351 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 LZTR1Q8N653 840 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 LRRC57Q8N9N7 239 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ATP11CQ8NB49 1132 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 RNF25Q96BH1 459 aaPredicted RBP19■□□□□ 0.63
CIRBP-245ENST00000621399 HMCESQ96FZ2 354 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 KLC2Q9H0B6 622 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 KCNF1Q9H3M0 494 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 LRRC19Q9H756 370 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 LZTFL1Q9NQ48 299 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ETNK2Q9NVF9 386 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 PPP2R2CQ9Y2T4 447 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ZNF318Q5VUA4 2279 aa19■□□□□ 0.63
CIRBP-245ENST00000621399 ATG2BQ96BY7 2078 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 KDELR3O43731 214 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 ZMPSTE24O75844 475 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 MT-CO1P00395 513 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 TDGF1P13385 188 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 HOXA6P31267 233 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 VASPP50552 380 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-245ENST00000621399 SLC20A2Q08357 652 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 TCF15Q12870 199 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 HNRNPA1L2Q32P51 320 aaKnown RBP18.99■□□□□ 0.63
CIRBP-245ENST00000621399 PGBD3Q8N328 593 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 NPWQ8N729 165 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 PCDH19Q8TAB3 1148 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 HMGB4Q8WW32 186 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 SLC39A8Q9C0K1 460 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 BCCIPQ9P287 314 aaKnown RBP eCLIP18.99■□□□□ 0.63
CIRBP-245ENST00000621399 HS3ST2Q9Y278 367 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 MFHAS1Q9Y4C4 1052 aa18.99■□□□□ 0.63
CIRBP-245ENST00000621399 ARHGAP42A6NI28 874 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 DFFAO00273 331 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 FNTBP49356 437 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 PAPOLAP51003 745 aaKnown RBP18.98■□□□□ 0.63
CIRBP-245ENST00000621399 ARF5P84085 180 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 DMWDQ09019 674 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 SERINC3Q13530 473 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 DLG2Q15700 870 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 AFMIDQ63HM1 303 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 ZNF662Q6ZS27 426 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 PEX26Q7Z412 305 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 KATNAL2Q8IYT4 538 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 SH2D3CQ8N5H7 860 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 NETO2Q8NC67 525 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 KRT35Q92764 455 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 FAF2Q96CS3 445 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 RNF157Q96PX1 679 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 MAK16Q9BXY0 300 aaKnown RBP18.98■□□□□ 0.63
CIRBP-245ENST00000621399 FAM126AQ9BYI3 521 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-245ENST00000621399 MTG2Q9H4K7 406 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 CD248Q9HCU0 757 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 PRSS16Q9NQE7 514 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 AMFRQ9UKV5 643 aa18.98■□□□□ 0.63
CIRBP-245ENST00000621399 DOCK4Q8N1I0 1966 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 EDDM13A0A1B0GTR0 161 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 TARSL2A2RTX5 802 aaKnown RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 ZSCAN5CA6NGD5 496 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 C3orf70A6NLC5 250 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 K7ERQ8 282 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 ATP9BO43861 1147 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 ZRANB2O95218 330 aaKnown RBP eCLIP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 SRCP12931 536 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 CTNNA1P35221 906 aaKnown RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 SERPINB6P35237 376 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 MARCKSL1P49006 195 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 CLCN6P51797 869 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms