RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.33□□□□□ -0.27
SKP2-209ENST00000620197 LZTS1Q9Y250 596 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 A0A096LPK6 155 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 PIRO00625 290 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 HCRTO43612 131 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 NCF2P19878 526 aaPredicted RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 MYBPC3Q14896 1274 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 NADK2Q4G0N4 442 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 ARTNQ5T4W7 220 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 PRAMEF18Q5VWM3 479 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 LIPMQ5VYY2 423 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 FAM43BQ6ZT52 329 aaPredicted RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 ZFP28Q8NHY6 868 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 COPS5Q92905 334 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 EMID1Q96A84 441 aaPredicted RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 RPS6KL1Q9Y6S9 549 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 JUNP05412 331 aaKnown RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 C2P06681 752 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 APOA4P06727 396 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 MPSTP25325 297 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 HOXA11P31270 313 aaPredicted RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 HADHAP40939 763 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 RPL14P50914 215 aaKnown RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 TXNL4AP83876 142 aaKnown RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 PPIDQ08752 370 aaKnown RBP13.33□□□□□ -0.28
SKP2-209ENST00000620197 PDK1Q15118 436 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 DLG2Q15700 870 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 STRA8Q7Z7C7 330 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 CNTD1Q8N815 330 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 CATSPER1Q8NEC5 780 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 ZNF597Q96LX8 424 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 PREBQ9HCU5 417 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 ANLNQ9NQW6 1124 aa13.33□□□□□ -0.28
SKP2-209ENST00000620197 TRIM64CA6NLI5 447 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 CREB3O43889 395 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 AMHP03971 560 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 RANBP1P43487 201 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 ACADSBP45954 432 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 HCAR3P49019 387 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 EMP3P54852 163 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 ZNF410Q86VK4 478 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 CENPLQ8N0S6 344 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 OR52K1Q8NGK4 314 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 TOP1MTQ969P6 601 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 FAM210AQ96ND0 272 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 PRDM12Q9H4Q4 367 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 TMPRSS4Q9NRS4 437 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 VTI1BQ9UEU0 232 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 AP4B1Q9Y6B7 739 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 TRIM64A6NGJ6 449 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 ERI2A8K979 691 aaKnown RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 KPNA7A9QM74 516 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 TRIM24O15164 1050 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 SLC35E2BP0CK96 405 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 INSRRP14616 1297 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 SERPINB6P35237 376 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 PITX1P78337 314 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 PTK2BQ14289 1009 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 XKR4Q5GH76 650 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 CES3Q6UWW8 571 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 B3GNT6Q6ZMB0 384 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 BNC2Q6ZN30 1099 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 DPH6Q7L8W6 267 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 LENG1Q96BZ8 264 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 PKP2Q99959 881 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 ILKAPQ9H0C8 392 aaPredicted RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 CAB39LQ9H9S4 337 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 UTP6Q9NYH9 597 aaKnown RBP13.32□□□□□ -0.28
SKP2-209ENST00000620197 CLIC5Q9NZA1 410 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 TUBGCP4Q9UGJ1 667 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 ZDHHC2Q9UIJ5 367 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 GMEB1Q9Y692 573 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 CEPT1Q9Y6K0 416 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 PCNTO95613 3336 aa13.32□□□□□ -0.28
SKP2-209ENST00000620197 TNFAIP8O95379 198 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 PGM3O95394 542 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 FYNP06241 537 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 HSPA13P48723 471 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 AIF1P55008 147 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 TMEM259Q4ZIN3 620 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 RBM44Q6ZP01 1051 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 ZC3HC1Q86WB0 502 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 CARM1Q86X55 608 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 MFSD6LQ8IWD5 586 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 KDM1BQ8NB78 822 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 DNAI2Q9GZS0 605 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 GBA3Q9H227 469 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms