RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ADRA1DP25100 572 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 SF3A3Q12874 501 aaKnown RBP eCLIP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 BMPR2Q13873 1038 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 ZKSCAN8Q15776 578 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 ANO4Q32M45 955 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 CERCAMQ5T4B2 595 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 CES3Q6UWW8 571 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 SPATA22Q8NHS9 363 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF558Q96NG5 402 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 APOL2Q9BQE5 337 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 HBS1LQ9Y450 684 aaKnown RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 USP15Q9Y4E8 981 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 ABLIM3O94929 683 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 SEC24AO95486 1093 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 OAS1P00973 400 aaKnown RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 CDH17Q12864 832 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 FRG1Q14331 258 aaKnown RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 RNF187Q5TA31 235 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 MROH9Q5TGP6 573 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 SNX30Q5VWJ9 437 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 TIFABQ6ZNK6 161 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 LRRC8CQ8TDW0 803 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 OVCA2Q8WZ82 227 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 GRAMD1AQ96CP6 724 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 PPP1R2P1Q96PQ5 205 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 IL22Q9GZX6 179 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 VPS11Q9H270 941 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 C12orf65Q9H3J6 166 aaKnown RBP19.42■□□□□ 0.7
PSPC1-206ENST00000619300 HSFX1Q9UBD0 423 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 DNMT3LQ9UJW3 386 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 COPEO14579 308 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 USP1O94782 785 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ALADP13716 330 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 DNAJB2P25686 324 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ATP5C1P36542 298 aaKnown RBP19.41■□□□□ 0.7
PSPC1-206ENST00000619300 DSG1Q02413 1049 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 DNAJC3Q13217 504 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 TPGS2Q68CL5 300 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 TMCO2Q7Z6W1 182 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-206ENST00000619300 SLC39A11Q8N1S5 342 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 PDZD8Q8NEN9 1154 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF75CPQ92670 426 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-206ENST00000619300 FATE1Q969F0 183 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 CERS2Q96G23 380 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 TMEM169Q96HH4 297 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF512Q96ME7 567 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-206ENST00000619300 FAM237BA0A1B0GVD1 139 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ATP9BO43861 1147 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 MT-CYBP00156 380 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-206ENST00000619300 HLA-DQB2P05538 268 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ERVK-10P10266 1014 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 TPH1P17752 444 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 CCNFP41002 786 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ETV4P43268 484 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 ANKRD20A4Q4UJ75 823 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 FAM117BQ6P1L5 589 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 PACS1Q6VY07 963 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 CCDC121Q6ZUS5 278 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 SPATA21Q7Z572 469 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
PSPC1-206ENST00000619300 SPOCK2Q92563 424 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 HMCESQ96FZ2 354 aa19.41■□□□□ 0.7
PSPC1-206ENST00000619300 SHROOM3Q8TF72 1996 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF840PA6NDX5 716 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 NEBLO76041 1014 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 PEX11BO96011 259 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 DHRS4L1P0CG22 281 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 RENBPP51606 427 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 KCNQ1P51787 676 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 GEMP55040 296 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 DEFB103AP81534 67 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 HNRNPDQ14103 355 aaKnown RBP19.4■□□□□ 0.7
PSPC1-206ENST00000619300 LRRC26Q2I0M4 334 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 NADSYN1Q6IA69 706 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 FAM47EQ6ZV65 393 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 CHSY1Q86X52 802 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 CNPY4Q8N129 248 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF669Q96BR6 464 aaPredicted RBP19.4■□□□□ 0.7
PSPC1-206ENST00000619300 RPRD1AQ96P16 312 aaPredicted RBP19.4■□□□□ 0.7
PSPC1-206ENST00000619300 SRPK1Q96SB4 655 aaKnown RBP19.4■□□□□ 0.7
PSPC1-206ENST00000619300 TBL1YQ9BQ87 522 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 ZFATQ9P243 1243 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 SLC17A6Q9P2U8 582 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF212Q9UDV6 495 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 GREB1Q4ZG55 1949 aa19.4■□□□□ 0.7
PSPC1-206ENST00000619300 ZCWPW2A0A1B0GU75 182 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 CCT8L1PA6NM43 557 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 MYO1CO00159 1063 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 TIMP1P01033 207 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 HMGA1P17096 107 aaKnown RBP19.39■□□□□ 0.69
PSPC1-206ENST00000619300 ITGB8P26012 769 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 GJA8P48165 433 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 BTG3Q14201 252 aaPredicted RBP19.39■□□□□ 0.69
PSPC1-206ENST00000619300 CGB2Q6NT52 195 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 RASSF3Q86WH2 238 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 ANKLE1Q8NAG6 615 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 PAWRQ96IZ0 340 aaKnown RBP19.39■□□□□ 0.69
PSPC1-206ENST00000619300 FAM111AQ96PZ2 611 aa19.39■□□□□ 0.69
PSPC1-206ENST00000619300 IQCGQ9H095 443 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms