RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 PSMD4P55036 377 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 DHFR2Q86XF0 187 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ATP13A3Q9H7F0 1226 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ASAH2Q9NR71 780 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 QSOX1O00391 747 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 PDE5AO76074 875 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 LDLRP01130 860 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 IFNA16P05015 189 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 GP5P40197 560 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 BNC1Q01954 994 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 RGS1Q08116 209 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 CRY1Q16526 586 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 HNRNPLLQ8WVV9 542 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 PNMA5Q96PV4 448 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ASB7Q9H672 318 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 TRPV2Q9Y5S1 764 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 WDR27A2RRH5 827 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 AVILO75366 819 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SERPINE1P05121 402 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 CCNA2P20248 432 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 RAD9BQ6WBX8 426 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF248Q8NDW4 579 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 RRAGCQ9HB90 399 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 CROTQ9UKG9 612 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 PAEPP09466 180 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 IGFBP4P22692 258 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 IL12RB1P42701 662 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF268Q14587 947 aaPredicted RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC39A12Q504Y0 691 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 CAMK1DQ8IU85 385 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 TMEM199Q8N511 208 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 KLHL23Q8NBE8 558 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ITFG1Q8TB96 612 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 NARS2Q96I59 477 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 UROC1Q96N76 676 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ANKRD27Q96NW4 1050 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 APBA2Q99767 749 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 C1QTNF3-AMACRE9PGA6 284 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ASNA1O43681 348 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 NEK3P51956 506 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 MTAPQ13126 283 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SMYD1Q8NB12 490 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 RP9Q8TA86 221 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 Q96MT0 163 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 MMADHCQ9H3L0 296 aaPredicted RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 MARCH2Q9P0N8 246 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNHIT2Q9UHR6 403 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 ARP10275 920 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 PRG2P13727 222 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 S100A3P33764 101 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 PSEN1P49768 467 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 RHAGQ02094 409 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SAMD4BQ5PRF9 694 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 FBXO42Q6P3S6 717 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 BTBD9Q96Q07 612 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 FTHL17Q9BXU8 183 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 SMPD4Q9NXE4 827 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 LYVE1Q9Y5Y7 322 aa11.34□□□□□ -0.59
CCDC144B-208ENST00000618081 COX7A2P14406 83 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 C21orf59P57076 290 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 INO80DQ53TQ3 878 aaPredicted RBP11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 OTUD3Q5T2D3 398 aaPredicted RBP11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 SYT12Q8IV01 421 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 SCUBE3Q8IX30 993 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 TRIM63Q969Q1 353 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC38A2Q96QD8 506 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 RPS6KA6Q9UK32 745 aa11.33□□□□□ -0.59
CCDC144B-208ENST00000618081 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 PDE2AO00408 941 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 RECQL5O94762 991 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 GRB10Q13322 594 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 N4BP2L1Q5TBK1 243 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 KYAT3Q6YP21 454 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 CELF6Q96J87 481 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 INTS7Q9NVH2 962 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 SLIT1O75093 1534 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 TRDMT1O14717 391 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 FAM58BPP0C7Q3 252 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 GHRP10912 638 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 MZT2AQ6P582 158 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 LPCAT2Q7L5N7 544 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 PDGFDQ9GZP0 370 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 CABYRO75952 493 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 ANXA5P08758 320 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 RPA3P35244 121 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 CYP4X1Q8N118 509 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 PIK3R5Q8WYR1 880 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 ADCY6O43306 1168 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 TNFAIP8O95379 198 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 BGNP21810 368 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 SCTRP47872 440 aa11.33□□□□□ -0.6
CCDC144B-208ENST00000618081 LRRC34Q8IZ02 419 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms