RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 USP32Q8NFA0 1604 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 CAPN8A6NHC0 703 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 VCLP18206 1134 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SOX10P56693 466 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 NFIAQ12857 509 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 MFSD14CQ5VZR4 134 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SPESP1Q6UW49 350 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 C1orf186Q6ZWK4 172 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SMIM5Q71RC9 77 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 IRF2BP1Q8IU81 584 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 C2orf69Q8N8R5 385 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 MARK4Q96L34 752 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 EPB41L4BQ9H329 900 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ACP6Q9NPH0 428 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ZSCAN32Q9NX65 697 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 MRPL39Q9NYK5 338 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 TMX2Q9Y320 296 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 GAKO14976 1311 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ZCCHC11Q5TAX3 1644 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 H3BNX3 289 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 EML1O00423 815 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 DBTP11182 482 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 FEN1P39748 380 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 IDH2P48735 452 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 USP46P62068 366 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 FMO1Q01740 532 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 DPYSQ14117 519 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 FAM187BQ17R55 369 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ATP13A4Q4VNC1 1196 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 FBXO47Q5MNV8 452 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 DENND5AQ6IQ26 1287 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 NAT14Q8WUY8 206 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 RTKNQ9BST9 563 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ZNF624Q9P2J8 865 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SQORQ9Y6N5 450 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 RGS14O43566 566 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 STX11O75558 287 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 TSPAN9O75954 239 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 VIL1P09327 827 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 LTA4HP09960 611 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 CASP7P55210 303 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SPIDRQ14159 915 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 PSTKQ8IV42 348 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SCUBE3Q8IX30 993 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 RTL3Q8N8U3 475 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 RBM15BQ8NDT2 890 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SYTL5Q8TDW5 730 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 TBL1YQ9BQ87 522 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 HGH1Q9BTY7 390 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ASB7Q9H672 318 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 KLHL28Q9NXS3 571 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC17A7Q9P2U7 560 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 PRKAG2Q9UGJ0 569 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 GMPPBQ9Y5P6 360 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 TCRBV9S1A1TA0A576 114 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ABCG1P45844 678 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 LHX1P48742 406 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC26A2P50443 739 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 DLG4P78352 724 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 GRIK3Q13003 919 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 CAMK2GQ13555 558 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 CDC73Q6P1J9 531 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ZBTB46Q86UZ6 589 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 MIEF1Q9NQG6 463 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 DYRK1BQ9Y463 629 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ASTN1O14525 1302 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.684e-6■■■■■ 174.1
CLTCL1-209ENST00000617103 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 BANF1O75531 89 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 PIAS1O75925 651 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 KCNH1O95259 989 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 PAICSP22234 425 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 EPHA3P29320 983 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 CAP2P40123 477 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 OR1G1P47890 313 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 CENPAP49450 140 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC30A10Q6XR72 485 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 CHMP1BQ7LBR1 199 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC9A9Q8IVB4 645 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 UXS1Q8NBZ7 420 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ZNF540Q8NDQ6 660 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 RDH11Q8TC12 318 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 TMEM165Q9HC07 324 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 hCG_1818297A0A087WSY0 165 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 NADKO95544 446 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ITGA2BP08514 1039 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ZNF135P52742 658 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 LAMTOR4Q0VGL1 99 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ZSWIM7Q19AV6 140 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 RFX4Q33E94 735 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 KHDRBS2Q5VWX1 349 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 ARHGAP36Q6ZRI8 547 aa10.81□□□□□ -0.68
CLTCL1-209ENST00000617103 NIPA1Q7RTP0 329 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms