RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 YIPF1Q9Y548 306 aa7.96□□□□□ -1.13
NEK3-207ENST00000617054 NYNRINQ9P2P1 1898 aaKnown RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 TCEA3O75764 348 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 C1QAP02745 245 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 HLA-DQB2P05538 268 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 URODP06132 367 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 MX2P20592 715 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 GLDCP23378 1020 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 MAGEA3P43357 314 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 CHRNA4P43681 627 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 TUFMP49411 452 aaKnown RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 TRIP4Q15650 581 aaPredicted RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 ZKSCAN8Q15776 578 aaPredicted RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 STXBP5Q5T5C0 1151 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 BEND5Q7L4P6 421 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 TMC7Q7Z402 723 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 ZNF683Q8IZ20 524 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 RTL3Q8N8U3 475 aaKnown RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 AZIN2Q96A70 460 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 BTN2A3PQ96KV6 586 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 FERMT1Q9BQL6 677 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 BRD8Q9H0E9 1235 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 SMG9Q9H0W8 520 aaKnown RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 ZNF334Q9HCZ1 680 aaPredicted RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 PSMC3IPQ9P2W1 217 aaPredicted RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 AFF4Q9UHB7 1163 aaKnown RBP7.96□□□□□ -1.14
NEK3-207ENST00000617054 GRID1Q9ULK0 1009 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 PSAT1Q9Y617 370 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 USP34Q70CQ2 3546 aa7.96□□□□□ -1.14
NEK3-207ENST00000617054 GMNCA6NCL1 334 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 HIDE1A8MVS5 230 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 HGSO14964 777 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 VIMP08670 466 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 ATP2A2P16615 1042 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 TPSB2P20231 275 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ELF1P32519 619 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 FDFT1P37268 417 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ERVFC1P60507 584 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CYP4F8P98187 520 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 IHHQ14623 411 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 TPSAB1Q15661 275 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 MSANTD2Q6P1R3 559 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ARHGAP18Q8N392 663 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ARL14EPQ8N8R7 260 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 ST13P5Q8NFI4 369 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 DPF3Q92784 378 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CYTH2Q99418 400 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 UBE2OQ9C0C9 1292 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 ZYG11BQ9C0D3 744 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 NT5MQ9NPB1 228 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 MRPL17Q9NRX2 175 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 LGALS13Q9UHV8 139 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 IKBKGQ9Y6K9 419 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 TRIOO75962 3097 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 SDR42E2A6NKP2 422 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 GRXCR1A8MXD5 290 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 KIAA0355O15063 1070 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 TGM5O43548 720 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 NEBLO76041 1014 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 INHBAP08476 426 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ZDHHC11BP0C7U3 371 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CA4P22748 312 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 MAGEA6P43360 314 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 WDR4P57081 412 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 POU6F1Q14863 301 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 SLC1A5Q15758 541 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 LRRC8BQ6P9F7 803 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ADGRD1Q6QNK2 874 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CEP128Q6ZU80 1094 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 TMEM150AQ86TG1 271 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 LRRC34Q8IZ02 419 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 C7orf61Q8IZ16 206 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 SLC25A41Q8N5S1 370 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ATP6V0D2Q8N8Y2 350 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 MCUQ8NE86 351 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 STAMBPL1Q96FJ0 436 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 AGAP2Q99490 1192 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 SLC13A1Q9BZW2 595 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 IGSF9Q9P2J2 1179 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 SLC17A7Q9P2U7 560 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 BACE2Q9Y5Z0 518 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ZFP37Q9Y6Q3 630 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 RPS6KL1Q9Y6S9 549 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 NCAM2O15394 837 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ARHGEF15O94989 841 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CXCL14O95715 111 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 RECKO95980 971 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 FGBP02675 491 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 DNAJB1P25685 340 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 CORO1AP31146 461 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 FAM133BQ5BKY9 247 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 HECTD3Q5T447 861 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 OR7D4Q8NG98 312 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 ZNF473Q8WTR7 871 aaKnown RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 SLC22A17Q8WUG5 538 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 EXOC2Q96KP1 924 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 C1orf74Q96LT6 269 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms