RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SERPINH1P50454 418 aaKnown RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 SLC5A3P53794 718 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 GPX6P59796 221 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 CNGA3Q16281 694 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 TAC4Q86UU9 113 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 MON1AQ86VX9 555 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZNF398Q8TD17 642 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 CCDC126Q96EE4 140 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZNF317Q96PQ6 595 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 ACBD6Q9BR61 282 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 RHOBTB2Q9BYZ6 727 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 IL1RL2Q9HB29 575 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 CRYL1Q9Y2S2 319 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 NCF1BA6NI72 391 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 NCF1CA8MVU1 366 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 MEI4A8MW99 385 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 FGFR1P11362 822 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 NCF1P14598 390 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 GABRB2P47870 512 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 RHBDF2Q6PJF5 856 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 HFE2Q6ZVN8 426 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 INPP5DQ92835 1189 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 CHRAC1Q9NRG0 131 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRMT13Q9NUP7 481 aaKnown RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 A0A1W2PQH9 124 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 SPTLC1O15269 473 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 LYPLA1O75608 230 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIGNO95427 931 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 CRTAMO95727 393 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 SOX11P35716 441 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 POLE2P56282 527 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 PRKAA1Q13131 559 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 KIRREL3Q8IZU9 778 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 AGAP11Q8TF27 550 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 KLHL5Q96PQ7 755 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 C2orf71A6NGG8 1288 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 KCNE1P15382 129 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 IVDP26440 423 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 CRABP2P29373 138 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 HMOX2P30519 316 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 CCL23P55773 120 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 PRKCZQ05513 592 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 KLC1Q07866 573 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SLC24A5Q71RS6 500 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TMC7Q7Z402 723 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SLC41A1Q8IVJ1 513 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 DEFB107AQ8IZN7 70 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 PDZD8Q8NEN9 1154 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SCAMP5Q8TAC9 235 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 DDI1Q8WTU0 396 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 MFSD3Q96ES6 412 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRMT6Q9UJA5 497 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 URODP06132 367 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 CSE1LP55060 971 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 ABCE1P61221 599 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 IL1RL1Q01638 556 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 LACTB2Q53H82 288 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RARS2Q5T160 578 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 MAMDC4Q6UXC1 1216 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 LPCAT1Q8NF37 534 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIDD1Q9HB75 910 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RGS18Q9NS28 235 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 GTF2IRD1Q9UHL9 959 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SOX13Q9UN79 622 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RREB1Q92766 1687 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RNF103-CHMP3A0A140T963 221 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 UGT1A9O60656 530 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 BPGMP07738 259 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TFE3P19532 575 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 ATP5C1P36542 298 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RHOAP61586 193 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 PURAQ00577 322 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 NOGQ13253 232 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 PSMD5Q16401 504 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RAB6CQ53S08 254 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 UBAP2Q5T6F2 1119 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 GDF6Q6KF10 455 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRIM15Q9C019 465 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RAB6CQ9H0N0 254 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 UGT1A7Q9HAW7 530 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 UGT1A10Q9HAW8 530 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 UGT1A8Q9HAW9 530 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 FBXW11Q9UKB1 542 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RNF112Q9ULX5 631 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TUFMP49411 452 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 PPM1JQ5JR12 505 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 ARCQ7LC44 396 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms