RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM117AQ9C073 453 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 POLR1BQ9H9Y6 1135 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 P4HA1P13674 534 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 POLR2FP61218 127 aaKnown RBP18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 DAB2P98082 770 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 KCNMA1Q12791 1236 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 CST6Q15828 149 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 MEA1Q16626 185 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 KRT39Q6A163 491 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 RSRC2Q7L4I2 434 aaKnown RBP18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 PLD4Q96BZ4 506 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 DEPDC7Q96QD5 511 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 OMDQ99983 421 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 CRACR2AQ9BSW2 395 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 THSD1Q9NS62 852 aa18.18■□□□□ 0.5
TRAPPC3-209ENST00000616395 OPA1O60313 960 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 RNASEH1O60930 286 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 SIN3BO75182 1162 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 CSO75390 466 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 NTRK1P04629 796 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 CD58P19256 250 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 POLR2EP19388 210 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 SFSWAPQ12872 951 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 ASIC2Q16515 512 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 MMAAQ8IVH4 418 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 MFSD2AQ8NA29 543 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 WFDC5Q8TCV5 224 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 TMA16Q96EY4 203 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 MYO19Q96H55 970 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 RRAGDQ9NQL2 400 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 FZD4Q9ULV1 537 aa18.17■□□□□ 0.5
TRAPPC3-209ENST00000616395 SERPING1P05155 500 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 UCHL3P15374 230 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 FERP16591 822 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 PON1P27169 355 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 SLC8A1P32418 973 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 CD70P32970 193 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 STAT1P42224 750 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 KLK7P49862 253 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 SGSHP51688 502 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 MCCD1P59942 119 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 PPP2CBP62714 309 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 PPP2CAP67775 309 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 RAPGEF1Q13905 1077 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 TRIP4Q15650 581 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 C6orf132Q5T0Z8 1188 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 KLHDC7AQ5VTJ3 777 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 TMEM139Q8IV31 216 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 SLC25A45Q8N413 288 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 EXD3Q8N9H8 876 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 TAF4BQ92750 862 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 NIF3L1Q9GZT8 377 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 INTS2Q9H0H0 1204 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 NLRC4Q9NPP4 1024 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 PPP2R2CQ9Y2T4 447 aa18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 EPN1Q9Y6I3 576 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-209ENST00000616395 SSU72P8A0A1W2PR75 194 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 LRRC53A6NM62 1247 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 TERTO14746 1132 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 HARS2P49590 506 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 ADPRHP54922 357 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 HNRNPA1L2Q32P51 320 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 NAPEPLDQ6IQ20 393 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 TRIM65Q6PJ69 517 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 AADATQ8N5Z0 425 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 OR14C36Q8NHC7 312 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 TRMT1Q9NXH9 659 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 APEX2Q9UBZ4 518 aa18.15■□□□□ 0.5
TRAPPC3-209ENST00000616395 BOD1L1Q8NFC6 3051 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 ARID1BQ8NFD5 2236 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 A0A1B0GVM2 712 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 SOWAHDA6NJG2 315 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 LATO43561 262 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 AKR1B10O60218 316 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 NDUFA10O95299 355 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 SLC9A1P19634 815 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 ST8SIA6P61647 398 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 YWHAGP61981 247 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 NFKB2Q00653 900 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 C9orf64Q5T6V5 341 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 E4F1Q66K89 784 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 CCDC81Q6ZN84 652 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 ENOSF1Q7L5Y1 443 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 KIAA1328Q86T90 577 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 ARHGAP18Q8N392 663 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 FBXL13Q8NEE6 735 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 TATDN2Q93075 761 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 TSGA10Q9BZW7 698 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 GANQ9H2C0 597 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 NHEJ1Q9H9Q4 299 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 RAB20Q9NX57 234 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 AIPL1Q9NZN9 384 aa18.14■□□□□ 0.49
TRAPPC3-209ENST00000616395 STOML2Q9UJZ1 356 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms