RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 FAM50BQ9Y247 325 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 SMIM31A0A1B0GVY4 71 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 DDTLA6NHG4 134 aaPredicted RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 CENPXA8MT69 81 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 LIN7AO14910 233 aaPredicted RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 EDF1O60869 148 aaKnown RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 SNRPB2P08579 225 aaKnown RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 ZNF268Q14587 947 aaPredicted RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 HIPK1Q86Z02 1210 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 KRT78Q8N1N4 520 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 TMEM132CQ8N3T6 1108 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 FITM2Q8N6M3 262 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 ZNF540Q8NDQ6 660 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 SPAG4Q9NPE6 437 aa9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 KRCC1Q9NPI7 259 aaPredicted RBP9.46□□□□□ -0.9
SH3GLB1-205ENST00000616170 CHADO15335 359 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 MAP3K13O43283 966 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 KCNH1O95259 989 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 IL6P05231 212 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ADRB2P07550 413 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 CNPP09543 421 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 UNC5AQ6ZN44 842 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 HPS6Q86YV9 775 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 HTRA1Q92743 480 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 LRRC19Q9H756 370 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 MIEF1Q9NQG6 463 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ACTL7BQ9Y614 415 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 A0A087X1B8 175 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 TRIM38O00635 465 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 CYP2B6P20813 491 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 NUP62P37198 522 aaPredicted RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 TAS2R40P59535 323 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 GCNT1Q02742 428 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 SPESP1Q6UW49 350 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 KCTD4Q8WVF5 259 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ZNF222Q9UK12 451 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 NUDT5Q9UKK9 219 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 SLC12A8A0AV02 714 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 TPD52L2O43399 206 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 TIPRLO75663 272 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 NR2C2P49116 596 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 SLC11A2P49281 568 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 CAMK2GQ13555 558 aaPredicted RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ARHGAP36Q6ZRI8 547 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 NEK10Q6ZWH5 1172 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 DEFB106AQ8N104 65 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 DPP10Q8N608 796 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 OR56A4Q8NGH8 313 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ABCG8Q9H221 673 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 NOL11Q9H8H0 719 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 PNPLA3Q9NST1 481 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 BUD23O43709 281 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 HNRNPLP14866 589 aaKnown RBP eCLIP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ADSSP30520 456 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 PRKCIP41743 596 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 PRKAA2P54646 552 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 PGM5Q15124 567 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 PYDC2Q56P42 97 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 SATL1Q86VE3 508 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 IQCKQ8N0W5 287 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 VCPIP1Q96JH7 1222 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 PRMT6Q96LA8 375 aaPredicted RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 INPP4AQ96PE3 977 aaPredicted RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 MTMR9Q96QG7 549 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 GINS4Q9BRT9 223 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 CLK4Q9HAZ1 481 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 S100A14Q9HCY8 104 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ZNRF3Q9ULT6 936 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 HBS1LQ9Y450 684 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ATP6AP2A0A1C7CYW4 349 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 AGPSO00116 658 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 ATP6AP2O75787 350 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 MYL12AP19105 171 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 RXRBP28702 533 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 SAMD7Q7Z3H4 446 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 IZUMO1Q8IYV9 350 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 CAB39LQ9H9S4 337 aa9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 DDX43Q9NXZ2 648 aaKnown RBP9.45□□□□□ -0.9
SH3GLB1-205ENST00000616170 LACTBL1A8MY62 500 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 TMEM114B3SHH9 223 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 TK2O00142 265 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 IFNA14P01570 189 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 CCDC166P0CW27 439 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 YBX3P16989 372 aaKnown RBP eCLIP9.44□□□□□ -0.94e-7■■□□□ 12.8
SH3GLB1-205ENST00000616170 SQLEQ14534 574 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 SLC1A5Q15758 541 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 PARP6Q2NL67 630 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 CYP4Z2PQ8N1L4 340 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 ACTRT2Q8TDY3 377 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 TRAPPC12Q8WVT3 735 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 MYOZ2Q9NPC6 264 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 MAP10Q9P2G4 905 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
SH3GLB1-205ENST00000616170 UMODL1Q5DID0 1318 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms