RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.9□□□□□ -0.98
TTC28-208ENST00000612946 EDF1O60869 148 aaKnown RBP8.9□□□□□ -0.99
TTC28-208ENST00000612946 PON1P27169 355 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 IFI35P80217 286 aaPredicted RBP8.9□□□□□ -0.99
TTC28-208ENST00000612946 TMEM44Q2T9K0 475 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 GALNTL6Q49A17 601 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 TMEM179Q6ZVK1 233 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 CYB5R4Q7L1T6 521 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 PUS7LQ9H0K6 701 aaKnown RBP8.9□□□□□ -0.99
TTC28-208ENST00000612946 KBTBD4Q9NVX7 518 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 MEMO1Q9Y316 297 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 RP1P56715 2156 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 EEF2KO00418 725 aaKnown RBP8.9□□□□□ -0.99
TTC28-208ENST00000612946 TGM6O95932 706 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 GRIA3P42263 894 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 SCNN1BP51168 640 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 TAF5Q15542 800 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 LIMD1Q9UGP4 676 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 DLG5Q8TDM6 1919 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 FBP2O00757 339 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 PLEKHA8P1O95397 391 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 PEX3P56589 373 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 KLHDC10Q6PID8 442 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 PHF12Q96QT6 1004 aa8.9□□□□□ -0.99
TTC28-208ENST00000612946 ZNF804BA4D1E1 1349 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 H0YJX3 145 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 PLOD2O00469 737 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 DFNA5O60443 496 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 CPXCR1Q8N123 301 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 KAT8Q9H7Z6 458 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 ANKRA2Q9H9E1 313 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 EFCAB6Q5THR3 1501 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 BCKDKO14874 412 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 RARAP10276 462 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 NR2F6P10588 404 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 RBM34P42696 430 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 KIZQ2M2Z5 673 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 TRAPPC3LQ5T215 181 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 IQCF2Q8IXL9 164 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 MKL1Q969V6 931 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 VANGL2Q9ULK5 521 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 ZNF451Q9Y4E5 1061 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 PLEKHG3A1L390 1219 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 DFFAO00273 331 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 TCEA3O75764 348 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 PGRP06401 933 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 RPS7P62081 194 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 CACNB1Q02641 598 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 FAM131AQ6UXB0 335 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 PIGWQ7Z7B1 504 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 C7orf31Q8N865 590 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 LRRC19Q9H756 370 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 POLD4Q9HCU8 107 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 PDE2AO00408 941 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 HDAC3O15379 428 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 FYNP06241 537 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 ADORA1P30542 326 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 CYP4V2Q6ZWL3 525 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 COLGALT2Q8IYK4 626 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 LBHD1Q9BQE6 289 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 TBC1D13Q9NVG8 400 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 MGAT4AQ9UM21 535 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 RNASEH1O60930 286 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 RHEBQ15382 184 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 FAM153CQ494X1 144 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 OR6B3Q8NGW1 331 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 TEX51A0A1B0GUA7 166 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 SH3D21A4FU49 640 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 B8ZZF3 427 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 FBXW4P57775 412 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 IL18R1Q13478 541 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 MTMR1Q13613 665 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 NT5DC3Q86UY8 548 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 VAT1Q99536 393 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 SARS2Q9NP81 518 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 CDH22Q9UJ99 828 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 C2orf81A6NN90 581 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 METTL18O95568 372 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 GABRB2P47870 512 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 TMBIM6P55061 237 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 ZNF45Q02386 682 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 CCSAPQ6IQ19 270 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 KCNV1Q6PIU1 500 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 PAGE2Q7Z2X7 111 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 SLC20A1Q8WUM9 679 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 EIF2AK1Q9BQI3 630 aaKnown RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 NINJ2Q9NZG7 142 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 ICE1Q9Y2F5 2266 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 ZFYVE16Q7Z3T8 1539 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 CYP11B1P15538 503 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 PITRM1Q5JRX3 1037 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 C9orf43Q8TAL5 461 aaPredicted RBP8.89□□□□□ -0.99
TTC28-208ENST00000612946 SHCBP1LQ9BZQ2 653 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 SPACA6W5XKT8 324 aa8.89□□□□□ -0.99
TTC28-208ENST00000612946 ACTR3P61158 418 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 VMACQ2NL98 169 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms