RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 GRB14Q14449 540 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TAZQ16635 292 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 METTL21CQ5VZV1 264 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 OLFML2BQ68BL8 750 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 MAMDC4Q6UXC1 1216 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 OSTM1Q86WC4 334 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TDRD5Q8NAT2 981 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 ZNF184Q99676 751 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 GLOD4Q9HC38 313 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 PNPOQ9NVS9 261 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 MYH3P11055 1940 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 F8W8V4 182 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 EPHA3P29320 983 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TKTP29401 623 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 LRPAP1P30533 357 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TBX4P57082 545 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 PTK2BQ14289 1009 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 GALNTL6Q49A17 601 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 RNF180Q86T96 592 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 DDIASQ8IXT1 998 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 KCTD4Q8WVF5 259 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 FAR2Q96K12 515 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TRIM4Q9C037 500 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TBC1D13Q9NVG8 400 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ZNF358Q9NW07 568 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 PRKAG3Q9UGI9 489 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ZMYND8Q9ULU4 1186 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 PADI3Q9ULW8 664 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TAF1P21675 1872 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 RNF103-CHMP3A0A140T963 221 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 BNIP3LO60238 219 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 MAGEC1O60732 1142 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 MYCP01106 439 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 PYGLP06737 847 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 UBTFL6P0CB48 400 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 HOXB8P17481 243 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 CDC25CP30307 473 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ELAVL2Q12926 359 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 USP4Q13107 963 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 BLMHQ13867 455 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 PDE1CQ14123 709 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 PLEKHG4Q58EX7 1191 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 FSTL4Q6MZW2 842 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 CYS1Q717R9 158 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 PTAR1Q7Z6K3 402 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 MPP5Q8N3R9 675 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 EFHBQ8N7U6 833 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 RGS17Q9UGC6 210 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 ENO4A6NNW6 628 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 MEI4A8MW99 385 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 NRP1O14786 923 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 UBDO15205 165 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 STX7O15400 261 aaKnown RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 DNAJC6O75061 913 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 DUSP11O75319 330 aaKnown RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 CASP2P42575 452 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 ATXN3P54252 364 aaPredicted RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 BRMS1LQ5PSV4 323 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 TRNP1Q6NT89 227 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 CHADLQ6NUI6 762 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 LAYNQ6UX15 382 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 C10orf107Q8IVU9 208 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 ULK2Q8IYT8 1036 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 ICA1LQ8NDH6 482 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 PIP4K2CQ8TBX8 421 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 KBTBD7Q8WVZ9 684 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 KCTD13Q8WZ19 329 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 EME1Q96AY2 570 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 EBF4Q9BQW3 602 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 FBXO44Q9H4M3 255 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 SUDS3Q9H7L9 328 aaPredicted RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 EML4Q9HC35 981 aaKnown RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 IL1RAPL1Q9NZN1 696 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 SIRPGQ9P1W8 387 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 PDP2Q9P2J9 529 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 ANGPTL3Q9Y5C1 460 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 PCDHB5Q9Y5E4 795 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 TM7SF2O76062 418 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 CLCNKBP51801 687 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 NEK3P51956 506 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 SLC39A12Q504Y0 691 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 IL31Q6EBC2 164 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 IFNEQ86WN2 208 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 TMEM40Q8WWA1 233 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 EMID1Q96A84 441 aaPredicted RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 WDR55Q9H6Y2 383 aaPredicted RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 TMPRSS4Q9NRS4 437 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 SLC7A8Q9UHI5 535 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 RAP2CQ9Y3L5 183 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 ANGPT2O15123 496 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 PEX11AO75192 247 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 H2AFYO75367 372 aaKnown RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 NDUFS3O75489 264 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 DLDP09622 509 aaKnown RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 ATP6V1C1P21283 382 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 ATP5F1P24539 256 aaPredicted RBP6.48□□□□□ -1.37
SNX13-213ENST00000611725 CRABP2P29373 138 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 GLUD2P49448 558 aa6.48□□□□□ -1.37
SNX13-213ENST00000611725 TPD52P55327 224 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms