RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 DPPA5A6NC42 116 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 GPR182O15218 404 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 PFDN1O60925 122 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TADA2AO75478 443 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 CELF2O95319 508 aaKnown RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 IL10P22301 178 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 PRKCHP24723 683 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 GCAP28676 217 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 RABGGTBP53611 331 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 NME5P56597 212 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 LILRA4P59901 499 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 INSCQ1MX18 579 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 EML3Q32P44 896 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 LRRC23Q53EV4 343 aaPredicted RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 TMEM63BQ5T3F8 832 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 GLB1LQ6UWU2 654 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 MARK2Q7KZI7 788 aaKnown RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 FAM35AQ86V20 835 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 NLGN2Q8NFZ4 835 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 WDR60Q8WVS4 1066 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 CCDC126Q96EE4 140 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 RPRD1AQ96P16 312 aaPredicted RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 ECSITQ9BQ95 431 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 MRGBPQ9NV56 204 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 ZNF358Q9NW07 568 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 VTI1BQ9UEU0 232 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 ANKRD6Q9Y2G4 727 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 IGKV6-21A0A0C4DH24 114 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 FAM159BA6NKW6 160 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 E5RI56 91 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 GNGT2O14610 69 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TPST1O60507 370 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 CSE1LP55060 971 aaKnown RBP8.84□□□□□ -0.99
LIG4-204ENST00000611712 PCID2Q5JVF3 399 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 NCBP2-AS2Q69YL0 99 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 NEPROQ6NW34 567 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TAF2Q6P1X5 1199 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 TOP6BLQ8N6T0 577 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 LPPQ93052 612 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 HAUS8Q9BT25 410 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 PTPRHQ9HD43 1115 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 CNGB3Q9NQW8 809 aa8.84□□□□□ -0.99
LIG4-204ENST00000611712 KLF11O14901 512 aa8.83□□□□□ -1
LIG4-204ENST00000611712 UBDO15205 165 aa8.83□□□□□ -1
LIG4-204ENST00000611712 NDUFS3O75489 264 aa8.83□□□□□ -1
LIG4-204ENST00000611712 RBP1P09455 135 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SMPD1P17405 629 aa8.83□□□□□ -1
LIG4-204ENST00000611712 ME2P23368 584 aa8.83□□□□□ -1
LIG4-204ENST00000611712 CRABP2P29373 138 aa8.83□□□□□ -1
LIG4-204ENST00000611712 PCBP1Q15365 356 aaKnown RBP eCLIP8.83□□□□□ -1
LIG4-204ENST00000611712 TEX44Q53QW1 395 aa8.83□□□□□ -1
LIG4-204ENST00000611712 C10orf120Q5SQS8 335 aa8.83□□□□□ -1
LIG4-204ENST00000611712 FRA10AC1Q70Z53 315 aa8.83□□□□□ -1
LIG4-204ENST00000611712 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
LIG4-204ENST00000611712 NUP93Q8N1F7 819 aa8.83□□□□□ -1
LIG4-204ENST00000611712 MAB21L3Q8N8X9 362 aa8.83□□□□□ -1
LIG4-204ENST00000611712 OR6Y1Q8NGX8 325 aa8.83□□□□□ -1
LIG4-204ENST00000611712 FAR2Q96K12 515 aa8.83□□□□□ -1
LIG4-204ENST00000611712 NFKBIZQ9BYH8 718 aa8.83□□□□□ -1
LIG4-204ENST00000611712 DRC3Q9H069 523 aa8.83□□□□□ -1
LIG4-204ENST00000611712 CDH19Q9H159 772 aa8.83□□□□□ -1
LIG4-204ENST00000611712 PNPLA8Q9NP80 782 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TMPRSS4Q9NRS4 437 aa8.83□□□□□ -1
LIG4-204ENST00000611712 FZD10Q9ULW2 581 aa8.83□□□□□ -1
LIG4-204ENST00000611712 MFHAS1Q9Y4C4 1052 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SNX13Q9Y5W8 968 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SUPT3HB4E1H0 165 aa8.83□□□□□ -1
LIG4-204ENST00000611712 LIN7AO14910 233 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 GSTA4O15217 222 aa8.83□□□□□ -1
LIG4-204ENST00000611712 ITM2AO43736 263 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SUPT3HO75486 399 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 PRKAA2P54646 552 aa8.83□□□□□ -1
LIG4-204ENST00000611712 HUNKP57058 714 aa8.83□□□□□ -1
LIG4-204ENST00000611712 EFEMP1Q12805 493 aa8.83□□□□□ -1
LIG4-204ENST00000611712 PEX6Q13608 980 aa8.83□□□□□ -1
LIG4-204ENST00000611712 DLG2Q15700 870 aa8.83□□□□□ -1
LIG4-204ENST00000611712 RALGPS1Q5JS13 557 aa8.83□□□□□ -1
LIG4-204ENST00000611712 MARC1Q5VT66 337 aa8.83□□□□□ -1
LIG4-204ENST00000611712 FSTL4Q6MZW2 842 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TAS2R42Q7RTR8 314 aa8.83□□□□□ -1
LIG4-204ENST00000611712 HPS6Q86YV9 775 aa8.83□□□□□ -1
LIG4-204ENST00000611712 CXorf38Q8TB03 319 aa8.83□□□□□ -1
LIG4-204ENST00000611712 COLEC11Q9BWP8 271 aa8.83□□□□□ -1
LIG4-204ENST00000611712 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
LIG4-204ENST00000611712 XPR1Q9UBH6 696 aa8.83□□□□□ -1
LIG4-204ENST00000611712 RAP2CQ9Y3L5 183 aa8.83□□□□□ -1
LIG4-204ENST00000611712 RGSL1A5PLK6 1076 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TREHO43280 583 aa8.83□□□□□ -1
LIG4-204ENST00000611712 DNAJC6O75061 913 aa8.83□□□□□ -1
LIG4-204ENST00000611712 RFPL1O75677 317 aa8.83□□□□□ -1
LIG4-204ENST00000611712 AP2A1O95782 977 aa8.83□□□□□ -1
LIG4-204ENST00000611712 IQCF3P0C7M6 154 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SLC2A3P11169 496 aa8.83□□□□□ -1
LIG4-204ENST00000611712 MPSTP25325 297 aa8.83□□□□□ -1
LIG4-204ENST00000611712 DNAJB2P25686 324 aa8.83□□□□□ -1
LIG4-204ENST00000611712 MSX2P35548 267 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 KLF10Q13118 480 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms