RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CXCR3P49682 368 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 DYNC1I2Q13409 638 aaKnown RBP20.8■□□□□ 0.92
SSBP3-216ENST00000610401 MAP7Q14244 749 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 KCTD2Q14681 263 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 SEL1L3Q68CR1 1132 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 KCNMB4Q86W47 210 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 MYO1HQ8N1T3 1032 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 FAM110BQ8TC76 370 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 OSMRQ99650 979 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 WDR41Q9HAD4 459 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 BFARQ9NZS9 450 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 KCNU1A8MYU2 1149 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 MAGEB3O15480 346 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 CDH15P55291 814 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 DGKDQ16760 1214 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 EPGNQ6UW88 154 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 TMEM110Q86TL2 294 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 RNF169Q8NCN4 708 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 ZFP28Q8NHY6 868 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 VPS39Q96JC1 886 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 KLHL32Q96NJ5 620 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 TRPV6Q9H1D0 765 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 CHST12Q9NRB3 414 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 SPTLC1O15269 473 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 EPHX2P34913 555 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 MPP1Q00013 466 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 MYLK3Q32MK0 819 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 GALNT8Q9NY28 637 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 PCDHB12Q9Y5F1 795 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 SNX13Q9Y5W8 968 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 HBP1O60381 514 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 MT-CYBP00156 380 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-216ENST00000610401 MAP3K7CLP57077 242 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 RARS2Q5T160 578 aaKnown RBP20.79■□□□□ 0.92
SSBP3-216ENST00000610401 CATSPER4Q7RTX7 472 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 PHF21BQ96EK2 531 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 GCOM2Q9BZD3 368 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-216ENST00000610401 SNX25Q9H3E2 840 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 PIGVQ9NUD9 493 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 SETD4Q9NVD3 440 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 DNAJC28Q9NX36 388 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 ERCC2P18074 760 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 DALRD3Q5D0E6 543 aaKnown RBP20.79■□□□□ 0.92
SSBP3-216ENST00000610401 IL23RQ5VWK5 629 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 RWDD4Q6NW29 188 aaKnown RBP20.79■□□□□ 0.92
SSBP3-216ENST00000610401 RPL10LQ96L21 214 aaKnown RBP20.79■□□□□ 0.92
SSBP3-216ENST00000610401 RBBP8Q99708 897 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 RNF39Q9H2S5 420 aa20.79■□□□□ 0.92
SSBP3-216ENST00000610401 IGKV6-21A0A0C4DH24 114 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 CCL22O00626 93 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 NFKB1P19838 968 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 GALK1P51570 392 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 LSAMPQ13449 338 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 SEPT6Q14141 434 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 ARHGAP18Q8N392 663 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 FERMT1Q9BQL6 677 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 ERAP1Q9NZ08 941 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 MORF4L1Q9UBU8 362 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 MCM3APO60318 1980 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 TSPAN1O60635 241 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 SMIM18P0DKX4 95 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 MYBPC1Q00872 1141 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 SH2D4BQ5SQS7 431 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 NT5DC4Q86YG4 428 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 RNF34Q969K3 372 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 ASB7Q9H672 318 aa20.78■□□□□ 0.92
SSBP3-216ENST00000610401 C9IYK1 514 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 FBXO21O94952 628 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 VAPBO95292 243 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 MCF2P10911 925 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 ATICP31939 592 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 SERPINB8P50452 374 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 MAPK10P53779 464 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 GJA9P57773 515 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 PPP1R3AQ16821 1122 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 FBXO48Q5FWF7 155 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 NOMO2Q5JPE7 1267 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 TIFABQ6ZNK6 161 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 APLFQ8IW19 511 aaPredicted RBP20.77■□□□□ 0.92
SSBP3-216ENST00000610401 TSNARE1Q96NA8 513 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 CIB1Q99828 191 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 XPR1Q9UBH6 696 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 PSMD13Q9UNM6 376 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 PTPRFP10586 1907 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 SOCS7O14512 581 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 VILLO15195 856 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 RNASEH2AO75792 299 aaKnown RBP20.77■□□□□ 0.92
SSBP3-216ENST00000610401 PABPC4LP0CB38 370 aaKnown RBP20.77■□□□□ 0.92
SSBP3-216ENST00000610401 INCA1Q0VD86 236 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 IPMKQ8NFU5 416 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 OR9I1Q8NGQ6 314 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 NXNL1Q96CM4 212 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 LRRC4Q9HBW1 653 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 NUDT5Q9UKK9 219 aa20.77■□□□□ 0.92
SSBP3-216ENST00000610401 LGALS2P05162 132 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 ZFXP17010 805 aaPredicted RBP20.77■□□□□ 0.91
SSBP3-216ENST00000610401 ADCYAP1R1P41586 468 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 ZBTB17Q13105 803 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 NPWQ8N729 165 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 TRIML2Q8N7C3 387 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms