RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 LONP2Q86WA8 852 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 VSIG1Q86XK7 387 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 ATP11CQ8NB49 1132 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 PRSS33Q8NF86 280 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 TSC1Q92574 1164 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 PSMB7Q99436 277 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 MAK16Q9BXY0 300 aaKnown RBP14.59□□□□□ -0.07
CTSA-219ENST00000607841 FBRSQ9HAH7 460 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 POLR3BQ9NW08 1133 aaPredicted RBP14.59□□□□□ -0.07
CTSA-219ENST00000607841 ZSCAN32Q9NX65 697 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 BCCIPQ9P287 314 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTSA-219ENST00000607841 SLCO3A1Q9UIG8 710 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 HS3ST2Q9Y278 367 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 HYOU1Q9Y4L1 999 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 RAD54BQ9Y620 910 aa14.59□□□□□ -0.07
CTSA-219ENST00000607841 EDDM13A0A1B0GTR0 161 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 LRRD1A4D1F6 860 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ARHGAP42A6NI28 874 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ZNF487B1APH4 448 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 RASA4BC9J798 803 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 RASA4O43374 803 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 KDELR3O43731 214 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ATP9BO43861 1147 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 SNAP91O60641 907 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 KRT1P04264 644 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 CD48P09326 243 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 TDGF1P13385 188 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 AMPD1P23109 780 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 KDELR1P24390 212 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 IL4RP24394 825 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ACVRL1P37023 503 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 NUMBP49757 651 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 STK19P49842 368 aaPredicted RBP14.58□□□□□ -0.08
CTSA-219ENST00000607841 TCF15Q12870 199 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ACCSLQ4AC99 568 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ANKRD20A8PQ5CZ79 823 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ANO7Q6IWH7 933 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ZNF662Q6ZS27 426 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 METTL3Q86U44 580 aaKnown RBP14.58□□□□□ -0.08
CTSA-219ENST00000607841 RASSF3Q86WH2 238 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 PGBD3Q8N328 593 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 SH2D3CQ8N5H7 860 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 UBE2Q2Q8WVN8 375 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ATRIPQ8WXE1 791 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 MYO19Q96H55 970 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 LRRC19Q9H756 370 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 PRDM16Q9HAZ2 1276 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 KLHL11Q9NVR0 708 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 ARIH1Q9Y4X5 557 aaPredicted RBP14.58□□□□□ -0.08
CTSA-219ENST00000607841 PCDHGA2Q9Y5H1 932 aa14.58□□□□□ -0.08
CTSA-219ENST00000607841 TTC34A8MYJ7 566 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 DCLK1O15075 740 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 AXIN1O15169 862 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 ZMPSTE24O75844 475 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 HLA-EP13747 358 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CNR2P34972 360 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 ARF5P84085 180 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CCDC173Q0VFZ6 552 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 SERINC3Q13530 473 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CAMK2GQ13555 558 aaPredicted RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 BYSLQ13895 437 aaKnown RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 DLG2Q15700 870 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 HEATR6Q6AI08 1181 aaKnown RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 KIAA1211LQ6NV74 962 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 WDR5BQ86VZ2 330 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 OR2T3Q8NH03 318 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CASKIN2Q8WXE0 1202 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 RAPGEF5Q92565 580 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 NELL1Q92832 810 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 ATOH1Q92858 354 aaPredicted RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 FAF2Q96CS3 445 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 HMCESQ96FZ2 354 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CELF6Q96J87 481 aaKnown RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 CCDC114Q96M63 670 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CEP44Q9C0F1 390 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 SLC39A8Q9C0K1 460 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 GOLPH3Q9H4A6 298 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 NOL6Q9H6R4 1146 aaKnown RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 PRSS16Q9NQE7 514 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 TRIM10Q9UDY6 481 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 AMFRQ9UKV5 643 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 GUCA1BQ9UMX6 200 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
CTSA-219ENST00000607841 KMT2EQ8IZD2 1858 aa14.57□□□□□ -0.08
CTSA-219ENST00000607841 CCDC66A2RUB6 948 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 GRID2IPA4D2P6 1211 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 RNASEH1O60930 286 aaKnown RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 PALMO75781 387 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.08
CTSA-219ENST00000607841 SRCP12931 536 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 GABRG2P18507 467 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 GLDCP23378 1020 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 PXNP49023 591 aaPredicted RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 FNTBP49356 437 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 SERPINH1P50454 418 aaKnown RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 PAPOLAP51003 745 aaKnown RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 MMRN1Q13201 1228 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms