RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GDF15Q99988 308 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PRKD2Q9BZL6 878 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ACSS3Q9H6R3 686 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 LRRC4CQ9HCJ2 640 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 NDFIP2Q9NV92 336 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 DZANK1Q9NVP4 752 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MSRAQ9UJ68 235 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CPQQ9Y646 472 aa12.55□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MYLKQ15746 1914 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ZBTB24O43167 697 aaPredicted RBP12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PRAMEF11O60813 436 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CNTN5O94779 1100 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ACSL3O95573 720 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CKMP06732 381 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SPATA31D3P0C874 917 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CES1P23141 567 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CD68P34810 354 aaPredicted RBP12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 LMAN1P49257 510 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GNA12Q03113 381 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MPP3Q13368 585 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PRSS36Q5K4E3 855 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 STEAP4Q687X5 459 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TXNDC8Q6A555 127 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SPATA31D4Q6ZUB0 917 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TFAP2DQ7Z6R9 452 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 BBS5Q8N3I7 341 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ARFGAP2Q8N6H7 521 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 FBXO36Q8NEA4 188 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ADAMTS19Q8TE59 1207 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PPP2R3CQ969Q6 453 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 HMCESQ96FZ2 354 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 C9orf72Q96LT7 481 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 EBNA1BP2Q99848 306 aaKnown RBP12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ATXN3LQ9H3M9 355 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 KIF9Q9HAQ2 790 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SP110Q9HB58 689 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GLOD4Q9HC38 313 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ACTL7BQ9Y614 415 aa12.54□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MAGEB16A2A368 324 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SDR42E2A6NKP2 422 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ARHGEF15O94989 841 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 JCHAINP01591 159 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SHBGP04278 402 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 RHOP08100 348 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 IRS1P35568 1242 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 NPY2RP49146 381 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 IRAK1P51617 712 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ZNF177Q13360 481 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 NAB1Q13506 487 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 DUSP6Q16828 381 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 BBS9Q3SYG4 887 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MARC1Q5VT66 337 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 METTL3Q86U44 580 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 FAM76AQ8TAV0 307 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SIGLEC10Q96LC7 697 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PWWP2AQ96N64 755 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SLC22A12Q96S37 553 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GORASP1Q9BQQ3 440 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CORO1BQ9BR76 489 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ACE2Q9BYF1 805 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SFXN1Q9H9B4 322 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 PDFQ9HBH1 243 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CASS4Q9NQ75 786 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GKN1Q9NS71 199 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 EURLQ9NYK6 297 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SENP1Q9P0U3 644 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 YBX2Q9Y2T7 364 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ZFP37Q9Y6Q3 630 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GOLGA6L7A0A1B0GV03 622 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 EXOC1LA0A1B0GW35 172 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 A0A1W2PRU2 124 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GOLGA8MH3BSY2 632 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CCL16O15467 120 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RGS16O15492 202 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KDELR3O43731 214 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NEBLO76041 1014 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms