RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 C3orf18Q9UK00 162 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 TRAFD1O14545 582 aaPredicted RBP21.41■■□□□ 1.02
SH3D19-211ENST00000604030 HDAC3O15379 428 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 NDUFA5Q16718 116 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 ZNF557Q8N988 423 aaPredicted RBP21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PCSK9Q8NBP7 692 aaKnown RBP21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PYDC1Q8WXC3 89 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 DNAJC19Q96DA6 116 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PORCNQ9H237 461 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 RPS6KA6Q9UK32 745 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 TMEM191CA6NGB0 347 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 F8VP50 259 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 OPLAHO14841 1288 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 MLYCDO95822 493 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 FCGRTP55899 365 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PHKG1Q16816 387 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 VWDEQ8N2E2 1590 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 TRIM8Q9BZR9 551 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 GABRB2P47870 512 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 SPIRE1Q08AE8 756 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 CYP2R1Q6VVX0 501 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 ZCCHC23Q6ZST2 131 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 SPATA20Q8TB22 786 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 VAV3Q9UKW4 847 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 EFCAB10A6NFE3 127 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 CNPP09543 421 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 INSRRP14616 1297 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 TPH1P17752 444 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 PBX1P40424 430 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 PPP3CAQ08209 521 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 MFSD5Q6N075 450 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 RASGEF1CQ8N431 466 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 C10orf53Q8N6V4 93 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 CENPIQ92674 756 aaPredicted RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 TMEM159Q96B96 161 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 HGH1Q9BTY7 390 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 GRIP2Q9C0E4 1043 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 ASTN1O14525 1302 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 RNASEH1O60930 286 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 DARSP14868 501 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 RPL22P35268 128 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 EPHB3P54753 998 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 PSME3P61289 254 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 BFSP2Q13515 415 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 C3orf67Q6ZVT6 689 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 NEK10Q6ZWH5 1172 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 KCNK18Q7Z418 384 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 TLK2Q86UE8 772 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 QRFPRQ96P65 431 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 POLR1EQ9GZS1 481 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 HDHD2Q9H0R4 259 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 RIBC2Q9H4K1 309 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 OPTCQ9UBM4 332 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 INVSQ9Y283 1065 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 CBX4O00257 560 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 EDF1O60869 148 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 EPN2O95208 641 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 PAICSP22234 425 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 GPSM1Q86YR5 675 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 IQCKQ8N0W5 287 aa21.4■■□□□ 1.02
SH3D19-211ENST00000604030 CELF6Q96J87 481 aaKnown RBP21.4■■□□□ 1.02
SH3D19-211ENST00000604030 LTFP02788 710 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 RPN2P04844 631 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 ABCB1P08183 1280 aaPredicted RBP21.39■■□□□ 1.02
SH3D19-211ENST00000604030 DGKAP23743 735 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 CENPAP49450 140 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 IL2P60568 153 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 FBXO16Q8IX29 292 aaPredicted RBP21.39■■□□□ 1.02
SH3D19-211ENST00000604030 CYLDQ9NQC7 956 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 SNTG2Q9NY99 539 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 VPS51Q9UID3 782 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 CORO2BQ9UQ03 480 aa21.39■■□□□ 1.02
SH3D19-211ENST00000604030 CNTNAP2Q9UHC6 1331 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 LACTBL1A8MY62 500 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 RTP1P59025 263 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 BST1Q10588 318 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 EPHX4Q8IUS5 362 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 RNF157Q96PX1 679 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 EFR3BQ9Y2G0 817 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 GSTK1Q9Y2Q3 226 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 EML1O00423 815 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 IFRD1O00458 451 aaPredicted RBP21.39■■□□□ 1.01
SH3D19-211ENST00000604030 CCDC130P13994 396 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 GPR15P49685 360 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 GRIK4Q16099 956 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 LACTB2Q53H82 288 aaPredicted RBP21.39■■□□□ 1.01
SH3D19-211ENST00000604030 C12orf56Q8IXR9 622 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 TEKT5Q96M29 485 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 MRPL57Q9BQC6 102 aaKnown RBP21.39■■□□□ 1.01
SH3D19-211ENST00000604030 FAM126AQ9BYI3 521 aaPredicted RBP21.39■■□□□ 1.01
SH3D19-211ENST00000604030 REXO4Q9GZR2 422 aaKnown RBP21.39■■□□□ 1.01
SH3D19-211ENST00000604030 SPATC1LQ9H0A9 340 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 ARHGAP23Q9P227 1491 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 E5RJQ4 531 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 UBXN8O00124 270 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 STK25O00506 426 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 PSMD10O75832 226 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 YY1P25490 414 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 KBTBD8Q8NFY9 601 aa21.39■■□□□ 1.01
SH3D19-211ENST00000604030 MBOAT7Q96N66 472 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms