RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SDC4P31431 198 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 DRD3P35462 400 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 CLEC16AQ2KHT3 1053 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 CCDC14Q49A88 953 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 ANO6Q4KMQ2 910 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 ARTNQ5T4W7 220 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.79■□□□□ 0.28
TUBE1-206ENST00000603722 SETD3Q86TU7 594 aaPredicted RBP16.79■□□□□ 0.28
TUBE1-206ENST00000603722 DCAF4L2Q8NA75 395 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 ATP11CQ8NB49 1132 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 SETD7Q8WTS6 366 aaKnown RBP16.79■□□□□ 0.28
TUBE1-206ENST00000603722 ERGIC2Q96RQ1 377 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 ZYG11BQ9C0D3 744 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 EBF2Q9HAK2 575 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 ADAM22Q9P0K1 906 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 HS3ST2Q9Y278 367 aa16.79■□□□□ 0.28
TUBE1-206ENST00000603722 LRRC10BA6NIK2 292 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 C2CD4BA6NLJ0 364 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 C1QTNF3-AMACRE9PGA6 284 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 K7ERQ8 282 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 HYAL3O43820 417 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-206ENST00000603722 ENDOD1O94919 500 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 ZNF883P0CG24 379 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 RRM1P23921 792 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 PPP2CBP62714 309 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 RACK1P63244 317 aaKnown RBP16.78■□□□□ 0.28
TUBE1-206ENST00000603722 PPP2CAP67775 309 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 PTP4A2Q12974 167 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 HNRNPDQ14103 355 aaKnown RBP16.78■□□□□ 0.28
TUBE1-206ENST00000603722 TRIP6Q15654 476 aaKnown RBP16.78■□□□□ 0.28
TUBE1-206ENST00000603722 ST3GAL2Q16842 350 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 KCNT1Q5JUK3 1230 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 FAM46CQ5VWP2 391 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 LINGO4Q6UY18 593 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 OR7D4Q8NG98 312 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 PIP4K2CQ8TBX8 421 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 SCNM1Q9BWG6 230 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 NAT10Q9H0A0 1025 aaKnown RBP16.78■□□□□ 0.28
TUBE1-206ENST00000603722 PCOLCE2Q9UKZ9 415 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 PCDHB9Q9Y5E1 797 aa16.78■□□□□ 0.28
TUBE1-206ENST00000603722 KCNK3O14649 394 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 MCF2LO15068 1137 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 ALOX15BO15296 676 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 SMAD6O43541 496 aaKnown RBP16.77■□□□□ 0.28
TUBE1-206ENST00000603722 RTN2O75298 545 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 KRT3P12035 628 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 GLDCP23378 1020 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 CCR5P51681 352 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 C21orf59P57076 290 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 ARL13BQ3SXY8 428 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 DRC7Q8IY82 874 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 SPON2Q9BUD6 331 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 SELENOOQ9BVL4 669 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 ACE2Q9BYF1 805 aaPredicted RBP16.77■□□□□ 0.28
TUBE1-206ENST00000603722 AASDHPPTQ9NRN7 309 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 ZNF212Q9UDV6 495 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 PPM1HQ9ULR3 514 aa16.77■□□□□ 0.28
TUBE1-206ENST00000603722 TBC1D3DA0A087WVF3 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3IA0A087WXS9 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3EA0A087X179 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3KA0A087X1G2 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 ILVBLA1L0T0 632 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3FA6NER0 549 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 C10orf142B7Z368 130 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3LB9A6J9 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 H0Y8X5 98 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CBX4O00257 560 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 SLC7A4O43246 635 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CBFA2T3O75081 653 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CALB1P05937 261 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CTSLP07711 333 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3HP0C7X1 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CTSKP43235 329 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 PTPN9P43378 593 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 GSCP56915 257 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 IL9RQ01113 521 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CNTN1Q12860 1018 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 AGBL4Q5VU57 503 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3GQ6DHY5 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3CQ6IPX1 549 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 RWDD4Q6NW29 188 aaKnown RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 MON1BQ7L1V2 547 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 STRADAQ7RTN6 431 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TBC1D3Q8IZP1 549 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CCDC185Q8N715 623 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 C3orf20Q8ND61 904 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 OR2A12Q8NGT7 310 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 FAM172AQ8WUF8 416 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 FAM131CQ96AQ9 280 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 CCDC114Q96M63 670 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 AGPAT1Q99943 283 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 TNKS2Q9H2K2 1166 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 ATP13A1Q9HD20 1204 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 PPARGC1AQ9UBK2 798 aaKnown RBP16.76■□□□□ 0.27
TUBE1-206ENST00000603722 PCDHGB2Q9Y5G2 931 aa16.76■□□□□ 0.27
TUBE1-206ENST00000603722 C1QTNF9BB2RNN3 333 aa16.75■□□□□ 0.27
TUBE1-206ENST00000603722 WNT9AO14904 365 aa16.75■□□□□ 0.27
TUBE1-206ENST00000603722 VILLO15195 856 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms