RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 VPS13AQ96RL7 3174 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 A0A1W2PQH9 124 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 GOLGA6BA6NDN3 693 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 C5orf60A6NFR6 353 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 WASH4PA8MWX3 477 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 KCNU1A8MYU2 1149 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 H7C0C1 242 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 DCLK1O15075 740 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 TP73O15350 636 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 FGF10O15520 208 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 GREM1O60565 184 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 GCATO75600 419 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 NUDT17P0C025 328 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 CHRNB1P11230 501 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 ARSAP15289 507 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 PECAM1P16284 738 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 GOT1P17174 413 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 MX2P20592 715 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 ATP5OP48047 213 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 DYNLT1P63172 113 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 DHX9Q08211 1270 aaKnown RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 RUNX3Q13761 415 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 TRIP4Q15650 581 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 NCBP2-AS2Q69YL0 99 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 PPP1R21Q6ZMI0 780 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 TAC4Q86UU9 113 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 MAML2Q8IZL2 1156 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 FAM3CQ92520 227 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 EDEM1Q92611 657 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 RNF34Q969K3 372 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 AZIN2Q96A70 460 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 OLFM3Q96PB7 478 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 RUFY1Q96T51 708 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 SH3GL2Q99962 352 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 CHRDQ9H2X0 955 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 EBF3Q9H4W6 596 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 ARHGEF4Q9NR80 690 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 OR12D3Q9UGF7 316 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 HBS1LQ9Y450 684 aaKnown RBP11.83□□□□□ -0.52
ZNF548-211ENST00000600927 WNT6Q9Y6F9 365 aa11.83□□□□□ -0.52
ZNF548-211ENST00000600927 STK25O00506 426 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 PPP1R12AO14974 1030 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 TLR5O60602 858 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 AMPD1P23109 780 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 MAGEA6P43360 314 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ITGA8P53708 1063 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 PMS2P54278 862 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 TPI1P60174 286 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 CDK16Q00536 496 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 GPS1Q13098 491 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 CCINQ13939 588 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ANGPT1Q15389 498 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 GAB4Q2WGN9 574 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 C1orf210Q8IVY1 113 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 PPIL6Q8IXY8 311 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 GSPT2Q8IYD1 628 aaKnown RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ATP6V0D2Q8N8Y2 350 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 TFB1MQ8WVM0 346 aaKnown RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ATP2A3Q93084 1043 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 VAT1Q99536 393 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 TMEM109Q9BVC6 243 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ROPN1BQ9BZX4 212 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 IRF2BPLQ9H1B7 796 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 CATSPERBQ9H7T0 1116 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ECT2Q9H8V3 914 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 ROPN1Q9HAT0 212 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 PRMT8Q9NR22 394 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 DUS2Q9NX74 493 aaKnown RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 DTLQ9NZJ0 730 aa11.82□□□□□ -0.52
ZNF548-211ENST00000600927 SAE1Q9UBE0 346 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 PPARGC1AQ9UBK2 798 aaKnown RBP11.82□□□□□ -0.52
ZNF548-211ENST00000600927 E2F8A0AVK6 867 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 GOLGA8KD6RF30 607 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 AGPSO00116 658 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 TRDMT1O14717 391 aaKnown RBP11.81□□□□□ -0.52
ZNF548-211ENST00000600927 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
ZNF548-211ENST00000600927 IFNB1P01574 187 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 IGLV3-27P01718 113 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 APOEP02649 317 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 MBL2P11226 248 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-211ENST00000600927 TSHRP16473 764 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 ERCC2P18074 760 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 GJA4P35212 333 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 RPL22P35268 128 aaKnown RBP11.81□□□□□ -0.52
ZNF548-211ENST00000600927 HSD17B3P37058 310 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 FDFT1P37268 417 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 TBX4P57082 545 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 FAM193AP78312 1265 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 COG7P83436 770 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 GAS6Q14393 721 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 TMEM196Q5HYL7 178 aa11.81□□□□□ -0.52
ZNF548-211ENST00000600927 RNASEH2BQ5TBB1 312 aaKnown RBP11.81□□□□□ -0.52
ZNF548-211ENST00000600927 MANEALQ5VSG8 457 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms