RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 NECAB3Q96P71 396 aaPredicted RBP20.91■□□□□ 0.94
PNKP-215ENST00000600910 P2RY13Q9BPV8 354 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 C2orf49Q9BVC5 232 aaPredicted RBP20.91■□□□□ 0.94
PNKP-215ENST00000600910 FRMD8P1Q9BZ68 369 aaPredicted RBP20.91■□□□□ 0.94
PNKP-215ENST00000600910 FBRSL1Q9HCM7 1045 aaKnown RBP20.91■□□□□ 0.94
PNKP-215ENST00000600910 J3KR12 359 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 SNAP91O60641 907 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 GLULP15104 373 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 PPIDQ08752 370 aaKnown RBP20.9■□□□□ 0.94
PNKP-215ENST00000600910 AP1B1Q10567 949 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 PREPLQ4J6C6 727 aaPredicted RBP20.9■□□□□ 0.94
PNKP-215ENST00000600910 TJAP1Q5JTD0 557 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 WFIKKN2Q8TEU8 576 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 C10orf88Q9H8K7 445 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 SP110Q9HB58 689 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 HOMER3Q9NSC5 361 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 VPS51Q9UID3 782 aa20.9■□□□□ 0.94
PNKP-215ENST00000600910 HACD1B0YJ81 288 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 PRRT4C9JH25 899 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 KAT7O95251 611 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 ARF5P84085 180 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 BYSLQ13895 437 aaKnown RBP20.89■□□□□ 0.94
PNKP-215ENST00000600910 PRKD1Q15139 912 aaPredicted RBP20.89■□□□□ 0.94
PNKP-215ENST00000600910 CYP1B1Q16678 543 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 SLC45A4Q5BKX6 768 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 MBLAC2Q68D91 279 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 SFTPA1Q8IWL2 248 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 ACDQ96AP0 544 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 MSANTD3Q96H12 275 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 TSGA13Q96PP4 275 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 QKIQ96PU8 341 aaKnown RBP eCLIP20.89■□□□□ 0.94
PNKP-215ENST00000600910 BRD8Q9H0E9 1235 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 MUTYHQ9UIF7 546 aa20.89■□□□□ 0.94
PNKP-215ENST00000600910 TBC1D3BA6NDS4 549 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 PRAMEF11O60813 436 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 ZMPSTE24O75844 475 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 APODP05090 189 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 POLR2EP19388 210 aaKnown RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 CCNCP24863 283 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 GRIA2P42262 883 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 IL10RBQ08334 325 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 PON2Q15165 354 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 OASLQ15646 514 aaKnown RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 DRICH1Q6PGQ1 229 aaPredicted RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 DARS2Q6PI48 645 aaKnown RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 LEKR1Q6ZMV7 388 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 TPRG1Q6ZUI0 275 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 ZNF572Q7Z3I7 529 aaPredicted RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 CCDC13Q8IYE1 715 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 C12orf50Q8NA57 414 aaPredicted RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 SPATA4Q8NEY3 305 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 NKD2Q969F2 451 aaPredicted RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 MAGOHBQ96A72 148 aaKnown RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 TTC17Q96AE7 1141 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 CIPCQ9C0C6 399 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 PDFQ9HBH1 243 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 RBM12Q9NTZ6 932 aaKnown RBP20.89■□□□□ 0.93
PNKP-215ENST00000600910 CA14Q9ULX7 337 aa20.89■□□□□ 0.93
PNKP-215ENST00000600910 TRIOO75962 3097 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 SHROOM3Q8TF72 1996 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 PHF2O75151 1096 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 VAV1P15498 845 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 RBL1P28749 1068 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 CTSOP43234 321 aaPredicted RBP20.88■□□□□ 0.93
PNKP-215ENST00000600910 ZNF33AQ06730 810 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 MLF2Q15773 248 aaPredicted RBP20.88■□□□□ 0.93
PNKP-215ENST00000600910 TIGD7Q6NT04 549 aaPredicted RBP20.88■□□□□ 0.93
PNKP-215ENST00000600910 LINGO4Q6UY18 593 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 CDKL3Q8IVW4 592 aaPredicted RBP20.88■□□□□ 0.93
PNKP-215ENST00000600910 SUGP1Q8IWZ8 645 aaKnown RBP20.88■□□□□ 0.93
PNKP-215ENST00000600910 EXOC4Q96A65 974 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 TMEM121Q9BTD3 319 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 ZNF148Q9UQR1 794 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 ACTL7AQ9Y615 435 aa20.88■□□□□ 0.93
PNKP-215ENST00000600910 BCLAF3A2AJT9 711 aaKnown RBP20.87■□□□□ 0.93
PNKP-215ENST00000600910 SHISA7A6NL88 538 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 KCNJ1P48048 391 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 SULT2A1Q06520 285 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 C2orf54Q08AI8 447 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 HEATR6Q6AI08 1181 aaKnown RBP20.87■□□□□ 0.93
PNKP-215ENST00000600910 RETSATQ6NUM9 610 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 TTC27Q6P3X3 843 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 NUDT18Q6ZVK8 323 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 UBALD2Q8IYN6 164 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 SORCS1Q8WY21 1168 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 FAM3CQ92520 227 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 RPL10LQ96L21 214 aaKnown RBP20.87■□□□□ 0.93
PNKP-215ENST00000600910 DDX47Q9H0S4 455 aaKnown RBP20.87■□□□□ 0.93
PNKP-215ENST00000600910 L2HGDHQ9H9P8 463 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 ARHGEF3Q9NR81 526 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 ELOVL2Q9NXB9 296 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 WNT16Q9UBV4 365 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 FBXL21Q9UKT6 434 aa20.87■□□□□ 0.93
PNKP-215ENST00000600910 A0A0A0MRY4 1105 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 ZSCAN5CA6NGD5 496 aaPredicted RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 CCDC188H7C350 402 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 KCNK1O00180 336 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 MATN3O15232 486 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 PEX11BO96011 259 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 COILP38432 576 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms