RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872		K7ERQ8	282 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	PLK4	O00444	970 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	WNT9A	O14904	365 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	SMAD6	O43541	496 aa	Known RBP	13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	SH3BP5	O60239	455 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	CD160	O95971	181 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	CTSL	P07711	333 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	ZNF883	P0CG24	379 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	GOT1	P17174	413 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	C5AR1	P21730	350 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	GLDC	P23378	1020 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	PTPN9	P43378	593 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	GRIA4	P48058	902 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	PSMD8	P48556	350 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	ATXN3	P54252	364 aa	Predicted RBP	13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	ADPRH	P54922	357 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	HDAC4	P56524	1084 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	ATP11A	P98196	1134 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	NRG1	Q02297	640 aa	Predicted RBP	13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	DLG2	Q15700	870 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	KIF19	Q2TAC6	998 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	HLA-B	Q31612	363 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	FAM72A	Q5TYM5	149 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	FAM72D	Q6L9T8	149 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872		Q6ZVU0	165 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	TFAP2D	Q7Z6R9	452 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	SETD3	Q86TU7	594 aa	Predicted RBP	13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	NLRP14	Q86W24	1093 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	FAM72B	Q86X60	149 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	NEK11	Q8NG66	645 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	SPAG5	Q96R06	1193 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	RTN4	Q9NQC3	1192 aa	Known RBP	13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	NDFIP2	Q9NV92	336 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	VPS51	Q9UID3	782 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	VPS28	Q9UK41	221 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	IGF2R	P11717	2491 aa		13.1	□□□□□ -0.31
FKRP-223	ENST00000600872	PTPRB	P23467	1997 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	DMXL2	Q8TDJ6	3036 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	SPAAR	A0A1B0GVQ0	90 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	MCF2L	O15068	1137 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	LAT	O43561	262 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	RNASEH1	O60930	286 aa	Known RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	RNASEH2A	O75792	299 aa	Known RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	FSBP	O95073	299 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	ADH1B	P00325	375 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	WNT1	P04628	370 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	TPM2	P07951	284 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	RFC1	P35251	1148 aa	Predicted RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	ADRA1B	P35368	520 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	AFF3	P51826	1226 aa	Known RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	TAS2R38	P59533	333 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	IQCB1	Q15051	598 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	PPP1R15B	Q5SWA1	713 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	AGBL4	Q5VU57	503 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	E4F1	Q66K89	784 aa	Predicted RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	WDR59	Q6PJI9	974 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	STRADA	Q7RTN6	431 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	HDDC3	Q8N4P3	179 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	DCAF4L2	Q8NA75	395 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	MSANTD4	Q8NCY6	345 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	OR7D4	Q8NG98	312 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	OR2A12	Q8NGT7	310 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	OR2T34	Q8NGX1	318 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	SNX19	Q92543	992 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	GAREM1	Q9H706	876 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	ARHGAP20	Q9P2F6	1191 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	NCKAP1	Q9Y2A7	1128 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	SNX11	Q9Y5W9	270 aa		13.09	□□□□□ -0.31
FKRP-223	ENST00000600872	CELSR3	Q9NYQ7	3312 aa		13.08	□□□□□ -0.31
FKRP-223	ENST00000600872		A0A1W2PR77	199 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	ILVBL	A1L0T0	632 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	SIGLEC16	A6NMB1	481 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	ALOX15B	O15296	676 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	SRGAP2	O75044	1071 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	IL1B	P01584	269 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	RHOC	P08134	193 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	SPINK2	P20155	84 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	RRM1	P23921	792 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	NNMT	P40261	264 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	CTSK	P43235	329 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	CCR5	P51681	352 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	PPP2CB	P62714	309 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	RACK1	P63244	317 aa	Known RBP	13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	PPP2CA	P67775	309 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	ARF5	P84085	180 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	CDO1	Q16878	200 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	ZNF423	Q2M1K9	1284 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	CCDC185	Q8N715	623 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	C3orf20	Q8ND61	904 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	SLC6A18	Q96N87	628 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	PPP1R9B	Q96SB3	815 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	AGPAT1	Q99943	283 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	OMD	Q99983	421 aa		13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	ACE2	Q9BYF1	805 aa	Predicted RBP	13.08	□□□□□ -0.32
FKRP-223	ENST00000600872	TTYH3	Q9C0H2	523 aa		13.08	□□□□□ -0.32

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