RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NMRAL1Q9HBL8 299 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 FBXW11Q9UKB1 542 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 CHRNGP07510 517 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 COX4I1P13073 169 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 PPP2R5DQ14738 602 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GSTA3Q16772 222 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 IQSEC1Q6DN90 963 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 TDRD5Q8NAT2 981 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 VPS39Q96JC1 886 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 TSC22D3Q99576 134 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 SMOQ99835 787 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 POMPQ9Y244 141 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 TIMM13Q9Y5L4 95 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GOLGA8QA0A0J9YX86 632 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GOLGA8OA6NCC3 632 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 MEIS3P2A8K0S8 358 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GOLGA8NF8WBI6 632 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 TK2O00142 265 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GABRDO14764 452 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 TRIM13O60858 407 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 MPOP05164 745 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 LYNP07948 512 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 SAT1P21673 171 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 NMBRP28336 390 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 CCR10P46092 362 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 SCAPQ12770 1279 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 TBL3Q12788 808 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GRB14Q14449 540 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 LPCAT4Q643R3 524 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 APLFQ8IW19 511 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 EDEM1Q92611 657 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 GATA5Q9BWX5 397 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 ADAMTS6Q9UKP5 1117 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 SLC39A10Q9ULF5 831 aa20.62■□□□□ 0.89
SHKBP1-225ENST00000600733 AP1G2O75843 785 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 KLF10Q13118 480 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 MFSD10Q14728 455 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 THEMIS2Q5TEJ8 643 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 TWF2Q6IBS0 349 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 ZMIZ2Q8NF64 920 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 NR1H4Q96RI1 486 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 EBF3Q9H4W6 596 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 MYBPHLA2RUH7 354 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 EME2A4GXA9 379 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 NCAM2O15394 837 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 ADGRG6Q86SQ4 1221 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 SPDYE1Q8NFV5 336 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 HDAC11Q96DB2 347 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 PCED1BQ96HM7 432 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 CELF6Q96J87 481 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 TUBGCP5Q96RT8 1024 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 MCMBPQ9BTE3 642 aa20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 WDR55Q9H6Y2 383 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-225ENST00000600733 TIMM44O43615 452 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 JCHAINP01591 159 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 MPSTP25325 297 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 SERPINB5P36952 375 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 IRX1P78414 480 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 GRM3Q14832 879 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 FSCBQ5H9T9 825 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 FAM35AQ86V20 835 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 LENG8Q96PV6 779 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 COLEC11Q9BWP8 271 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 TCF7L2Q9NQB0 619 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 PACSIN3Q9UKS6 424 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 ARHGAP26Q9UNA1 814 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 CCL15-CCL14A0A0B4J2E2 113 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 ERI2A8K979 691 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 TMEM114B3SHH9 223 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 NEMP1O14524 444 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 LRPAP1P30533 357 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 AIF1P55008 147 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 ADAM17P78536 824 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 GALNT2Q10471 571 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 CCL15Q16663 113 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 SFT2D3Q587I9 215 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 FBXW8Q8N3Y1 598 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 MS4A4AQ96JQ5 239 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 SENP8Q96LD8 212 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 PPP1R10Q96QC0 940 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 APBA2Q99767 749 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 ACE2Q9BYF1 805 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 RHOBTB2Q9BYZ6 727 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 IL22Q9GZX6 179 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 TASP1Q9H6P5 420 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 OXSMQ9NWU1 459 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 OR12D3Q9UGF7 316 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 RAD54BQ9Y620 910 aa20.6■□□□□ 0.89
SHKBP1-225ENST00000600733 PHGDHO43175 533 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 RNASEH1O60930 286 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 FBXO21O94952 628 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 YBX3P16989 372 aaKnown RBP eCLIP20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 PEX2P28328 305 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 SERPINB6P35237 376 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 GLRBP48167 497 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 HCAR3P49019 387 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 AFF1P51825 1210 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 FRG1Q14331 258 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 OTOP3Q7RTS5 596 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 PDSS2Q86YH6 399 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms