RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CXorf51AA0A1B0GTR3 108 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 MACROD2A1Z1Q3 448 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 TTC34A8MYJ7 566 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 H3BRJ5 948 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 K7ERQ8 282 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 SMAD6O43541 496 aaKnown RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 KDELR3O43731 214 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 ATP9BO43861 1147 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 RAMP2O60895 175 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 SRCP12931 536 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 HOXB2P14652 356 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 GJC1P36383 396 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 ARL4AP40617 200 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 DGKEP52429 567 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 NDST2P52849 883 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 COPAP53621 1224 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 CSTF1Q05048 431 aaKnown RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 SERINC3Q13530 473 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 CAMK2GQ13555 558 aaPredicted RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 POLD3Q15054 466 aaPredicted RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 HNRNPA1L2Q32P51 320 aaKnown RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 ZNF528Q3MIS6 628 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 C9orf64Q5T6V5 341 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 MFSD7Q6UXD7 560 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 DAAM2Q86T65 1068 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 VSIG1Q86XK7 387 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 REXO1L1PQ8IX06 675 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 SH2D3CQ8N5H7 860 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 CAMKK1Q8N5S9 505 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 KCTD6Q8NC69 237 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 KIAA1524Q8TCG1 905 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 PTPRN2Q92932 1015 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 RNF157Q96PX1 679 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 HHIPQ96QV1 700 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 SPON2Q9BUD6 331 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 C2orf49Q9BVC5 232 aaPredicted RBP14.06□□□□□ -0.16
VRK3-219ENST00000600137 PRSS16Q9NQE7 514 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 RAPGEFL1Q9UHV5 662 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 PPP2R2CQ9Y2T4 447 aa14.06□□□□□ -0.16
VRK3-219ENST00000600137 ZNF487B1APH4 448 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 H0Y858 1186 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 PSTPIP1O43586 416 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 SPOPO43791 374 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 PALMO75781 387 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 CCDC175P0C221 793 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 VAV1P15498 845 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 GABRG2P18507 467 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 PXNP49023 591 aaPredicted RBP14.05□□□□□ -0.16
VRK3-219ENST00000600137 SLC10A2Q12908 348 aaPredicted RBP14.05□□□□□ -0.16
VRK3-219ENST00000600137 PAFAH1B3Q15102 231 aaKnown RBP14.05□□□□□ -0.16
VRK3-219ENST00000600137 FNDC3BQ53EP0 1204 aaKnown RBP14.05□□□□□ -0.16
VRK3-219ENST00000600137 NCBP2-AS2Q69YL0 99 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 SERPINA13PQ6UXR4 307 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 LINGO4Q6UY18 593 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 ARHGAP36Q6ZRI8 547 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 ZBTB44Q8NCP5 570 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 ERLEC1Q96DZ1 483 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 FAM129BQ96TA1 746 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 MKRN2Q9H000 416 aaKnown RBP14.05□□□□□ -0.16
VRK3-219ENST00000600137 KCNH6Q9H252 994 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 PDFQ9HBH1 243 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 ATP13A1Q9HD20 1204 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 EBF1Q9UH73 591 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 GUCA1BQ9UMX6 200 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 SLC8A2Q9UPR5 921 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 PCDHA3Q9Y5H8 950 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 MYO15AQ9UKN7 3530 aa14.05□□□□□ -0.16
VRK3-219ENST00000600137 CCDC163A0A0D9SF12 145 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 J3KR12 359 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 CBX4O00257 560 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 DAPK3O43293 454 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 PEX11BO96011 259 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 EPHX1P07099 455 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 TNNT1P13805 278 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 CTNNA2P26232 953 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 CTNNA1P35221 906 aaKnown RBP14.04□□□□□ -0.16
VRK3-219ENST00000600137 ETFBP38117 255 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 CDKN2BP42772 138 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 PAPOLAP51003 745 aaKnown RBP14.04□□□□□ -0.16
VRK3-219ENST00000600137 SLC20A2Q08357 652 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 ADCY2Q08462 1091 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 KRT81Q14533 505 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 E2F5Q15329 346 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 DLG2Q15700 870 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 PARP15Q460N3 678 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 SLC9A4Q6AI14 798 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 SDE2Q6IQ49 451 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 MAP7D3Q8IWC1 876 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 KATNAL2Q8IYT4 538 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 TXLNBQ8N3L3 684 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 LZTR1Q8N653 840 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 PLD5Q8N7P1 536 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 MDGA1Q8NFP4 955 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 ALG3Q92685 438 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
VRK3-219ENST00000600137 RNF25Q96BH1 459 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms