RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OR1E1P30953 314 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 MAT2AP31153 395 aaKnown RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 NUDT1P36639 197 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 METAP1P53582 386 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 PPP2CBP62714 309 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 PPP2CAP67775 309 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 CCDC15Q0P6D6 951 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 SCAPQ12770 1279 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 C5orf22Q49AR2 442 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 ALFQ53S48 1182 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 AGBL4Q5VU57 503 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 NAA35Q5VZE5 725 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 CCNI2Q6ZMN8 369 aaPredicted RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 TFAP2DQ7Z6R9 452 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 SETD3Q86TU7 594 aaPredicted RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 NOP9Q86U38 636 aaKnown RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 GATAD2AQ86YP4 633 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 GALNT15Q8N3T1 639 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 OXR1Q8N573 874 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 DCAF4L2Q8NA75 395 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 EPS8L1Q8TE68 723 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 NT5C3BQ969T7 300 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 NAA15Q9BXJ9 866 aaKnown RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 STK33Q9BYT3 514 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 CCDC86Q9H6F5 360 aaKnown RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 DYRK4Q9NR20 520 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 TOR4AQ9NXH8 423 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 TAB2Q9NYJ8 693 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 SARDHQ9UL12 918 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 PPM1HQ9ULR3 514 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 DMTF1Q9Y222 760 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 HS3ST2Q9Y278 367 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 OR51B4Q9Y5P0 310 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 SNX10Q9Y5X0 201 aa10.05□□□□□ -0.8
VRK3-216ENST00000599342 KMT2BQ9UMN6 2715 aaPredicted RBP10.05□□□□□ -0.8
VRK3-216ENST00000599342 PLXNA2O75051 1894 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 TMEM131Q92545 1883 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 A0A1W2PR77 199 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 TLR4O00206 839 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 KPNA3O00505 521 aaPredicted RBP10.04□□□□□ -0.8
VRK3-216ENST00000599342 LATO43561 262 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 SNAP91O60641 907 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 SRGAP2O75044 1071 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 WNT1P04628 370 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 MMEP08473 750 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 SRCP12931 536 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 FLT3P36888 993 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 ANP32AP39687 249 aaKnown RBP10.04□□□□□ -0.8
VRK3-216ENST00000599342 RECQLP46063 649 aaPredicted RBP10.04□□□□□ -0.8
VRK3-216ENST00000599342 CLCN6P51797 869 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 NOMO3P69849 1222 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 CNTN1Q12860 1018 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 STAT4Q14765 748 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 SETMARQ53H47 684 aaPredicted RBP10.04□□□□□ -0.8
VRK3-216ENST00000599342 C2CD6Q53TS8 623 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 PRAMEF14Q5SWL7 426 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 FKBP15Q5T1M5 1219 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 DPY19L2P1Q6NXN4 242 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 TMPRSS7Q7RTY8 843 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 TRIM69Q86WT6 500 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 FAM131BQ86XD5 332 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 PROSER1Q86XN7 944 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 ZNF677Q86XU0 584 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 MFSD2AQ8NA29 543 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 CPA5Q8WXQ8 436 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 FAM131CQ96AQ9 280 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 C1orf74Q96LT6 269 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 CFAP57Q96MR6 1250 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 HAPLN3Q96S86 360 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 PSMB7Q99436 277 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 VPS16Q9H269 839 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 PREBQ9HCU5 417 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 ANLNQ9NQW6 1124 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 METTL5Q9NRN9 209 aaKnown RBP10.04□□□□□ -0.8
VRK3-216ENST00000599342 MPP6Q9NZW5 540 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 VPS51Q9UID3 782 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
VRK3-216ENST00000599342 IGLV3-10A0A075B6K4 115 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 A0A0D9SEW6 157 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 DRGXA6NNA5 263 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 C10orf142B7Z368 130 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 PRAMEF26H0Y7S4 382 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 I6L893 689 aaPredicted RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 CBX4O00257 560 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ENC1O14682 589 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 WNT9AO14904 365 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 GFPT2O94808 682 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 DKK1O94907 266 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 LDOC1O95751 146 aaPredicted RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 MT-CO1P00395 513 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 PRNPP04156 253 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 RRM1P23921 792 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 EPHA8P29322 1005 aaPredicted RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 CHRNA3P32297 505 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 NXPH1P58417 271 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 POLR2FP61218 127 aaKnown RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 ATP11AP98196 1134 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 OVGP1Q12889 678 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 CDO1Q16878 200 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms