RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 AXIN1O15169 862 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 RASA4O43374 803 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 ZMPSTE24O75844 475 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 CD48P09326 243 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 TNNT1P13805 278 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 AMPD1P23109 780 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 GLDCP23378 1020 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 NDST2P52849 883 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 CCZ1BP86790 482 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 CCZ1P86791 482 aaPredicted RBP14.69□□□□□ -0.06
LIG1-208ENST00000595758 SLC20A2Q08357 652 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 CAMK2GQ13555 558 aaPredicted RBP14.69□□□□□ -0.06
LIG1-208ENST00000595758 HNRNPA1L2Q32P51 320 aaKnown RBP14.69□□□□□ -0.06
LIG1-208ENST00000595758 PARP15Q460N3 678 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 RETSATQ6NUM9 610 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 DAAM2Q86T65 1068 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 WDR5BQ86VZ2 330 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 LONP2Q86WA8 852 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 RASSF3Q86WH2 238 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 RHOT1Q8IXI2 618 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 PGBD3Q8N328 593 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 CALN1Q9BXU9 219 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 GOLPH3Q9H4A6 298 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 KLHL11Q9NVR0 708 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 HPCAL4Q9UM19 191 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 HS3ST2Q9Y278 367 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 ARIH1Q9Y4X5 557 aaPredicted RBP14.69□□□□□ -0.06
LIG1-208ENST00000595758 A0A0U1RQJ8 604 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 EDDM13A0A1B0GTR0 161 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 MACROD2A1Z1Q3 448 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 TARSL2A2RTX5 802 aaKnown RBP14.68□□□□□ -0.06
LIG1-208ENST00000595758 ATP9BO43861 1147 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 MT-CO1P00395 513 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 PTMAP06454 111 aaKnown RBP14.68□□□□□ -0.06
LIG1-208ENST00000595758 GABRG2P18507 467 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 IL4RP24394 825 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 MMRN1Q13201 1228 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 DPYSL3Q14195 570 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 IFI16Q16666 785 aaKnown RBP14.68□□□□□ -0.06
LIG1-208ENST00000595758 ACCSLQ4AC99 568 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 ZC3H14Q6PJT7 736 aaKnown RBP14.68□□□□□ -0.06
LIG1-208ENST00000595758 LINGO4Q6UY18 593 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 ZNF354CQ86Y25 554 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 SH2D3CQ8N5H7 860 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 LZTR1Q8N653 840 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 ATP11CQ8NB49 1132 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 ZBTB44Q8NCP5 570 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 MDGA1Q8NFP4 955 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 OR2T3Q8NH03 318 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 RAPGEF5Q92565 580 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 HMCESQ96FZ2 354 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 CELF6Q96J87 481 aaKnown RBP14.68□□□□□ -0.06
LIG1-208ENST00000595758 KLC2Q9H0B6 622 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 MTG2Q9H4K7 406 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 LRRC19Q9H756 370 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 PRSS16Q9NQE7 514 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 TRIM10Q9UDY6 481 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 R4GN57 208 aa14.68□□□□□ -0.06
LIG1-208ENST00000595758 LRRD1A4D1F6 860 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 ARHGAP42A6NI28 874 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 K7ERQ8 282 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 DCLK1O15075 740 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 PSTPIP1O43586 416 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 KDELR3O43731 214 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 SIN3BO75182 1162 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 CCDC175P0C221 793 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 NDUFV2P19404 249 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 KDELR1P24390 212 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 CLCN6P51797 869 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 GEMIN4P57678 1058 aaKnown RBP14.67□□□□□ -0.06
LIG1-208ENST00000595758 ARF5P84085 180 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 SERINC3Q13530 473 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 DLG2Q15700 870 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 ODF2Q5BJF6 829 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 ANKRD20A8PQ5CZ79 823 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 C9orf64Q5T6V5 341 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 AFMIDQ63HM1 303 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 TMCO3Q6UWJ1 677 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 TMPRSS6Q8IU80 811 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 NPWQ8N729 165 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 KIAA1524Q8TCG1 905 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 FRS2Q8WU20 508 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 PDLIM2Q96JY6 352 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 MRGPRX1Q96LB2 322 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 ZNF670Q9BS34 389 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 TPSD1Q9BZJ3 242 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 TSGA10Q9BZW7 698 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 SLC39A8Q9C0K1 460 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 FBRSQ9HAH7 460 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 PRDM16Q9HAZ2 1276 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 ETNK2Q9NVF9 386 aa14.67□□□□□ -0.06
LIG1-208ENST00000595758 DDX56Q9NY93 547 aaKnown RBP14.67□□□□□ -0.06
LIG1-208ENST00000595758 CXorf51AA0A1B0GTR3 108 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 ZSCAN5CA6NGD5 496 aaPredicted RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 SMAD6O43541 496 aaKnown RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 KRT1P04264 644 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 SRCP12931 536 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 SERPINH1P50454 418 aaKnown RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 PAPOLAP51003 745 aaKnown RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 USP39Q53GS9 565 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms