RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 GRIK1P39086 918 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 PDK1Q15118 436 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 LHX8Q68G74 356 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 TAC4Q86UU9 113 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SPATA2LQ8IUW3 424 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 HOMEZQ8IX15 550 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 ZBTB8BQ8NAP8 495 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 NTAN1Q96AB6 310 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SKA1Q96BD8 255 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SLX1AQ9BQ83 275 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 TMEM165Q9HC07 324 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 HEY2Q9UBP5 337 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SQORQ9Y6N5 450 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 A0A0J9YVX5 310 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 TYROBPO43914 113 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 FAM155BO75949 473 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 STK10O94804 968 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SERPINB3P29508 390 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 PRKD1Q15139 912 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SLC1A5Q15758 541 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SLC39A12Q504Y0 691 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 PM20D1Q6GTS8 502 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 MCUQ8NE86 351 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 OR12D3Q9UGF7 316 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 SSX2IPQ9Y2D8 614 aa17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 ZNF638Q14966 1978 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-205ENST00000594973 TSC2P49815 1807 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 INHBAP08476 426 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 TPSB2P20231 275 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 MAGEA10P43363 369 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 XIAPP98170 497 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 SCAPQ12770 1279 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 SEMA5AQ13591 1074 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 PAFAH1B3Q15102 231 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 TPSAB1Q15661 275 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 TMCO4Q5TGY1 634 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 ZNF554Q86TJ5 538 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 PPM1NQ8N819 430 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 GFM2Q969S9 779 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 PGAP3Q96FM1 320 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 PLAC1Q9HBJ0 212 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 MYO18AQ92614 2054 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 AP1G1O43747 822 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 F9P00740 461 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 SLC5A3P53794 718 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 AIF1P55008 147 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 CRADDP78560 199 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 CDK16Q00536 496 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 FAAP100Q0VG06 881 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 SEMA3BQ13214 749 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 MAPRE1Q15691 268 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 CFAP157Q5JU67 520 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 SCN4BQ8IWT1 228 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 NPWQ8N729 165 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 DQX1Q8TE96 717 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 FERMT1Q9BQL6 677 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 C12orf65Q9H3J6 166 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 TIMMDC1Q9NPL8 285 aa17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 ABI2Q9NYB9 513 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-205ENST00000594973 CXorf49A8MYA2 514 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 OPHN1O60890 802 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 FKBP6O75344 327 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SPAG6O75602 509 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 CIB2O75838 187 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 TGDSO95455 350 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 EOMESO95936 686 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 PSMB4P28070 264 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 GLUD2P49448 558 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 CXCR3P49682 368 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 PGFP49763 221 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 WASHC5Q12768 1159 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 ASPHQ12797 758 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 MED21Q13503 144 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 CASC4Q6P4E1 433 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 B3GNT6Q6ZMB0 384 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 UNC5AQ6ZN44 842 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 TMPRSS6Q8IU80 811 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 URGCPQ8TCY9 931 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 MZB1Q8WU39 189 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 DEPDC1BQ8WUY9 529 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SLC44A1Q8WWI5 657 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SIGLEC10Q96LC7 697 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 HMX1Q9NP08 348 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 TBC1D13Q9NVG8 400 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 RRN3Q9NYV6 651 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 NUDT5Q9UKK9 219 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SRGAP2BP0DMP2 458 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 TYMPP19971 482 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 MAGEA3P43357 314 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 ARFIP2P53365 341 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 ACTR3P61158 418 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 CYLC2Q14093 348 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SDHAF4Q5VUM1 108 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 AAGABQ6PD74 315 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 ZNF567Q8N184 647 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms