RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ITPRIPL1Q6GPH6 555 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 CHRDL2Q6WN34 429 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 TRMT10CQ7L0Y3 403 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 CNTD1Q8N815 330 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 MCUQ8NE86 351 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 RIN3Q8TB24 985 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ITFG1Q8TB96 612 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ING5Q8WYH8 240 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ARHGEF2Q92974 986 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 TMA16Q96EY4 203 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 ZSWIM3Q96MP5 696 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 GORASP1Q9BQQ3 440 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 FRMD8Q9BZ67 464 aaPredicted RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 CDC42EP4Q9H3Q1 356 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 ILVBLA1L0T0 632 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 TYW5A2RUC4 315 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 E7ESA3 106 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 J3KR12 359 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 TBL1XO60907 577 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 TCF3P15923 654 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ACVRL1P37023 503 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 CDK16Q00536 496 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 CBLBQ13191 982 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 TCEAL5Q5H9L2 206 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 CXorf57Q6NSI4 855 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 PPP1R21Q6ZMI0 780 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 CENPUQ71F23 418 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ACBD3Q9H3P7 528 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 EIF2B3Q9NR50 452 aaKnown RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.23■□□□□ 0.99
PNKP-203ENST00000593946 A0A0D9SEW6 157 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 GOLGA6BA6NDN3 693 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 E7EVH7 732 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 EIF3HO15372 352 aaKnown RBP eCLIP21.23■□□□□ 0.99
PNKP-203ENST00000593946 IL10RBQ08334 325 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 USP4Q13107 963 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 HNRNPDQ14103 355 aaKnown RBP21.23■□□□□ 0.99
PNKP-203ENST00000593946 ZNF77Q15935 545 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 FNBP1LQ5T0N5 605 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 RARS2Q5T160 578 aaKnown RBP21.23■□□□□ 0.99
PNKP-203ENST00000593946 EFHBQ8N7U6 833 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 TDRD5Q8NAT2 981 aaKnown RBP21.23■□□□□ 0.99
PNKP-203ENST00000593946 SERPINB12Q96P63 405 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 ZIM3Q96PE6 472 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 ZNF576Q9H609 170 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 SP110Q9HB58 689 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 RSPH14Q9UHP6 348 aa21.23■□□□□ 0.99
PNKP-203ENST00000593946 F5H423 210 aaPredicted RBP21.22■□□□□ 0.99
PNKP-203ENST00000593946 RIPK2O43353 540 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 CACNG3O60359 315 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 PRAMEF11O60813 436 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 RHOCP08134 193 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 NFKB1P19838 968 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 HOXD9P28356 352 aaPredicted RBP21.22■□□□□ 0.99
PNKP-203ENST00000593946 MAGEA4P43358 317 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 RGS19P49795 217 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 CBX2Q14781 532 aaPredicted RBP21.22■□□□□ 0.99
PNKP-203ENST00000593946 MSS51Q4VC12 460 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 MPP7Q5T2T1 576 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 UBAP2Q5T6F2 1119 aaKnown RBP21.22■□□□□ 0.99
PNKP-203ENST00000593946 ZNF354CQ86Y25 554 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 ARID3BQ8IVW6 561 aaPredicted RBP21.22■□□□□ 0.99
PNKP-203ENST00000593946 PDIK1LQ8N165 341 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 USP33Q8TEY7 942 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 SAYSD1Q9NPB0 183 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 FAM53CQ9NYF3 392 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 PLAAQ9Y263 795 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 DOCK8Q8NF50 2099 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 MIA3Q5JRA6 1907 aa21.22■□□□□ 0.99
PNKP-203ENST00000593946 AGPSO00116 658 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 ALOX15BO15296 676 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 LUC7L3O95232 432 aaKnown RBP21.21■□□□□ 0.99
PNKP-203ENST00000593946 TTC4O95801 387 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 WEE1P30291 646 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 RENBPP51606 427 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 TNK2Q07912 1038 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 PDIA2Q13087 525 aaKnown RBP21.21■□□□□ 0.99
PNKP-203ENST00000593946 RNF43Q68DV7 783 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 ZNF783Q6ZMS7 281 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 ZNF534Q76KX8 674 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 CAND1Q86VP6 1230 aaKnown RBP21.21■□□□□ 0.99
PNKP-203ENST00000593946 KLHDC8BQ8IXV7 354 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 TEX26Q8N6G2 289 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 OR7D4Q8NG98 312 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 PDFQ9HBH1 243 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 RBM22Q9NW64 420 aaKnown RBP eCLIP21.21■□□□□ 0.994e-6■■■□□ 16.3
PNKP-203ENST00000593946 NINJ2Q9NZG7 142 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 NFS1Q9Y697 457 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 SZT2Q5T011 3432 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 C5orf42Q9H799 3197 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 LINC01565O15544 149 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 HLA-DQB2P05538 268 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 NUDT17P0C025 328 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 MAGEA3P43357 314 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 FASTKD3Q14CZ7 662 aaKnown RBP21.21■□□□□ 0.99
PNKP-203ENST00000593946 MPPE1Q53F39 396 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 GPR149Q86SP6 731 aa21.21■□□□□ 0.99
PNKP-203ENST00000593946 PDCD7Q8N8D1 485 aaKnown RBP21.21■□□□□ 0.99
PNKP-203ENST00000593946 H0Y626 953 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 BANF1O75531 89 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms