RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 PIP4K2CQ8TBX8 421 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 ALG14Q96F25 216 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 MIR1-1HGQ9H1L0 117 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 WDCPQ9H6R7 721 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SGK2Q9HBY8 427 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 ANLNQ9NQW6 1124 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-213ENST00000593254 PLXNA2O75051 1894 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.24
H3F3B-213ENST00000593254 DOCK9Q9BZ29 2069 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 TNFSF14O43557 240 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 RNASEH1O60930 286 aaKnown RBP13.57□□□□□ -0.24
H3F3B-213ENST00000593254 CLDN11O75508 207 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 GFPT2O94808 682 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 F9P00740 461 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 ITPKBP27987 946 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 NUMBP49757 651 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 STK19P49842 368 aaPredicted RBP13.57□□□□□ -0.24
H3F3B-213ENST00000593254 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
H3F3B-213ENST00000593254 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
H3F3B-213ENST00000593254 CDR2Q01850 454 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 SUZ12Q15022 739 aaKnown RBP13.57□□□□□ -0.24
H3F3B-213ENST00000593254 CST6Q15828 149 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 NAA35Q5VZE5 725 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 TRNP1Q6NT89 227 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 ARCQ7LC44 396 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 BNIPLQ7Z465 357 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 C14orf80Q86SX3 495 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF683Q8IZ20 524 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 OR52K2Q8NGK3 314 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 SLC20A1Q8WUM9 679 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 PTPRN2Q92932 1015 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 PPP1R9BQ96SB3 815 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 TBCBQ99426 244 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 FEM1AQ9BSK4 669 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 TKTL2Q9H0I9 626 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 NLRC4Q9NPP4 1024 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 SERGEFQ9UGK8 458 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 LIMA1Q9UHB6 759 aaKnown RBP13.57□□□□□ -0.24
H3F3B-213ENST00000593254 TMEM59LQ9UK28 342 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 TBC1D30Q9Y2I9 924 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 OR51B4Q9Y5P0 310 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 SLCO1B1Q9Y6L6 691 aa13.57□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-213ENST00000593254 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 FAM170AA1A519 330 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 LRRC10BA6NIK2 292 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 GOLGA8CPA6NN73 597 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 CYSRT1A8MQ03 144 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 LGALS16A8MUM7 142 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 MID1O15344 667 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 MBD3O95983 291 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 CYP1A1P04798 512 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF18P17022 549 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 SOX5P35711 763 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 NNMTP40261 264 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 CDH4P55283 916 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 FMO1Q01740 532 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 DEUP1Q05D60 604 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF177Q13360 481 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-213ENST00000593254 ELAVL3Q14576 367 aaKnown RBP13.56□□□□□ -0.24
H3F3B-213ENST00000593254 SND1Q7KZF4 910 aaKnown RBP eCLIP13.56□□□□□ -0.246e-27■□□□□ 9.2
H3F3B-213ENST00000593254 MMAAQ8IVH4 418 aaKnown RBP13.56□□□□□ -0.24
H3F3B-213ENST00000593254 STK40Q8N2I9 435 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF843Q8N446 348 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 FRS2Q8WU20 508 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 SNX19Q92543 992 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 SIK2Q9H0K1 926 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 OSGEPQ9NPF4 335 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 FBXL12Q9NXK8 326 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 ADAMTS1Q9UHI8 967 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 FZD4Q9ULV1 537 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 NCKAP1Q9Y2A7 1128 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 RAI2Q9Y5P3 530 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 MYLKQ15746 1914 aa13.56□□□□□ -0.24
H3F3B-213ENST00000593254 COL5A1P20908 1838 aaPredicted RBP13.55□□□□□ -0.24
H3F3B-213ENST00000593254 A0A1W2PP55 124 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 C10orf142B7Z368 130 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 GOLGA8SH3BPF8 625 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 PLK4O00444 970 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 CNTN5O94779 1100 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 IGHV4-34P06331 123 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 VAV1P15498 845 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 CHRNB2P17787 502 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 MMP8P22894 467 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 CD27P26842 260 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms