RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FAM208BQ5VWN6 2430 aa13.63□□□□□ -0.23
APOC1-209ENST00000592885 DOCK4Q8N1I0 1966 aa13.63□□□□□ -0.23
APOC1-209ENST00000592885 CABIN1Q9Y6J0 2220 aa13.63□□□□□ -0.23
APOC1-209ENST00000592885 PLXNB3Q9ULL4 1909 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 IGLV3-10A0A075B6K4 115 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3DA0A087WVF3 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3IA0A087WXS9 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3EA0A087X179 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3KA0A087X1G2 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 CXorf51AA0A1B0GTR3 108 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3FA6NER0 549 aaPredicted RBP13.62□□□□□ -0.23
APOC1-209ENST00000592885 DRGXA6NNA5 263 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3LB9A6J9 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 PES1O00541 588 aaKnown RBP13.62□□□□□ -0.23
APOC1-209ENST00000592885 ADCY5O95622 1261 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 WNT1P04628 370 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 CAPNS1P04632 268 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 RHOCP08134 193 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3HP0C7X1 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 CDK4P11802 303 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 SRCP12931 536 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 ARRB1P49407 418 aaPredicted RBP13.62□□□□□ -0.23
APOC1-209ENST00000592885 IRAK1P51617 712 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 ACCSLQ4AC99 568 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 KCNT1Q5JUK3 1230 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 C6orf118Q5T5N4 469 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 AGBL4Q5VU57 503 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3GQ6DHY5 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3CQ6IPX1 549 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 ZNF783Q6ZMS7 281 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 Q6ZVU0 165 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 BNIPLQ7Z465 357 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 C14orf80Q86SX3 495 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 PRPF39Q86UA1 669 aaKnown RBP13.62□□□□□ -0.23
APOC1-209ENST00000592885 PROSER1Q86XN7 944 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBC1D3Q8IZP1 549 aaPredicted RBP13.62□□□□□ -0.23
APOC1-209ENST00000592885 PIP4K2CQ8TBX8 421 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 EPS8L1Q8TE68 723 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 SERAC1Q96JX3 654 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 HAPLN3Q96S86 360 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 TBCBQ99426 244 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 SIK2Q9H0K1 926 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 ERVMER34-1Q9H9K5 563 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 PREBQ9HCU5 417 aa13.62□□□□□ -0.23
APOC1-209ENST00000592885 RNGTTO60942 597 aaKnown RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 CNTN5O94779 1100 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 TPM2P07951 284 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 ATXN1LP0C7T5 689 aaKnown RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 ZNF18P17022 549 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 TFE3P19532 575 aaPredicted RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 EPHA8P29322 1005 aaPredicted RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 FLT3P36888 993 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 GGCXP38435 758 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 NXPH1P58417 271 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 RNASE9P60153 205 aaKnown RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 PPP2CBP62714 309 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 PPP2CAP67775 309 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 NOMO3P69849 1222 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 SCAPQ12770 1279 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 SETMARQ53H47 684 aaPredicted RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 NOP9Q86U38 636 aaKnown RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 MFSD2AQ8NA29 543 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 PSMB7Q99436 277 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 RETREG1Q9H6L5 497 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 ANLNQ9NQW6 1124 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 SAMSN1Q9NSI8 373 aaKnown RBP13.61□□□□□ -0.23
APOC1-209ENST00000592885 DKK4Q9UBT3 224 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 VPS51Q9UID3 782 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 TMEM59LQ9UK28 342 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 SARDHQ9UL12 918 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 PCDHGA1Q9Y5H4 931 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 KNL1Q8NG31 2342 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 PKD1L2Q7Z442 2459 aa13.61□□□□□ -0.23
APOC1-209ENST00000592885 ILVBLA1L0T0 632 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 E9PAM4 449 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 I6L893 689 aaPredicted RBP13.6□□□□□ -0.23
APOC1-209ENST00000592885 TLR4O00206 839 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 KCNK3O14649 394 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 RTN2O75298 545 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 PRNPP04156 253 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 ITGAVP06756 1048 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 OR1E1P30953 314 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 RXRGP48443 463 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 IL9RQ01113 521 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 CNTN1Q12860 1018 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 SMAD1Q15797 465 aaKnown RBP13.6□□□□□ -0.23
APOC1-209ENST00000592885 ALFQ53S48 1182 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 TAF3Q5VWG9 929 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 TRIM72Q6ZMU5 477 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 ATP11CQ8NB49 1132 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 TMIEQ8NEW7 156 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 SAP25Q8TEE9 199 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 CEP44Q9C0F1 390 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 GANQ9H2C0 597 aa13.6□□□□□ -0.23
APOC1-209ENST00000592885 CCDC86Q9H6F5 360 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms