RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PPARGP37231 505 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 IGBP1P78318 339 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 MS4A2Q01362 244 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 RFTN1Q14699 578 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 KLHDC10Q6PID8 442 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 LCA5Q86VQ0 697 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 TMEM151AQ8N4L1 468 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 NETO2Q8NC67 525 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 OR6B3Q8NGW1 331 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 HSFY1Q96LI6 401 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 DPEP3Q9H4B8 488 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 CAB39LQ9H9S4 337 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 CASS4Q9NQ75 786 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 VANGL2Q9ULK5 521 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 PCDHGB4Q9UN71 923 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 PCDHGB5Q9Y5G0 923 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 GRID2O43424 1007 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 TSPAN1O60635 241 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ZNF189O75820 626 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 BCAS2O75934 225 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 TFEBP19484 476 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 APOFQ13790 326 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 HSP90AA5PQ58FG0 334 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 BORAQ6PGQ7 559 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ZYG11AQ6WRX3 759 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 CRYBG2Q8N1P7 616 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 PGLYRP2Q96PD5 576 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 PPP1R16BQ96T49 567 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ARPC5LQ9BPX5 153 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 R3HDMLQ9H3Y0 253 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 VTI1BQ9UEU0 232 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 CNOT11Q9UKZ1 510 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 PADI4Q9UM07 663 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 GNEQ9Y223 722 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 SLCO1B7G3V0H7 640 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 TADA2AO75478 443 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 TMCC1O94876 653 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ME2P23368 584 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 EPHA3P29320 983 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 GTF2A2P52657 109 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 PRKAA1Q13131 559 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 OLIG2Q13516 323 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 LIPMQ5VYY2 423 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 BNIPLQ7Z465 357 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 DEFB106AQ8N104 65 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 LRRC52Q8N7C0 313 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 AGR3Q8TD06 166 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 DDI1Q8WTU0 396 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 LENG1Q96BZ8 264 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 RCN3Q96D15 328 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 SLX1AQ9BQ83 275 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ACE2Q9BYF1 805 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 IL22Q9GZX6 179 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 COPS7BQ9H9Q2 264 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 PPP1R1BQ9UD71 204 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ANKRD6Q9Y2G4 727 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 TNS1Q9HBL0 1735 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 CABYRO75952 493 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 HADHAP40939 763 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 NSUN2Q08J23 767 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 MPP3Q13368 585 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 DPYSQ14117 519 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ZBTB6Q15916 424 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 ZFP28Q8NHY6 868 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 C1QTNF1Q9BXJ1 281 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 SENP6Q9GZR1 1112 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 CXCL16Q9H2A7 254 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 PLEKHA5Q9HAU0 1116 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 HSFX1Q9UBD0 423 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 DMTF1Q9Y222 760 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 AKT3Q9Y243 479 aa15.13■□□□□ 0.01
SMARCA4-219ENST00000592604 MCM3APO60318 1980 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 MAGEB16A2A368 324 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ACOT8O14734 319 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ZSCAN9O15535 394 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 PIGNO95427 931 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 SBK3P0C264 359 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 FAM58BPP0C7Q3 252 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 PTPN3P26045 913 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ADORA2BP29275 332 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 SULT1E1P49888 294 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 MYLK3Q32MK0 819 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ARL13AQ5H913 290 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 OTUD1Q5VV17 481 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 KCTD11Q693B1 232 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 BHLHE22Q8NFJ8 381 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 NT5C3BQ969T7 300 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 VPS39Q96JC1 886 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 PKP2Q99959 881 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 SLC2A11Q9BYW1 496 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 WDR41Q9HAD4 459 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 EFCAB1Q9HAE3 211 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ERI2A8K979 691 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 NEMP1O14524 444 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 DCLK1O15075 740 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 VTNP04004 478 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 PGK2P07205 417 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 TXNP10599 105 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 DPP6P42658 865 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms