RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 SNX1Q13596 522 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 BYSLQ13895 437 aaKnown RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 KRT81Q14533 505 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 CBX2Q14781 532 aaPredicted RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 HIF1AQ16665 826 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 KCTD19Q17RG1 926 aaPredicted RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 SWI5Q1ZZU3 235 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 ARL13BQ3SXY8 428 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 C5orf22Q49AR2 442 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 RARS2Q5T160 578 aaKnown RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 ZFYVE27Q5T4F4 411 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 CES5AQ6NT32 575 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 RHBDF2Q6PJF5 856 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 ZDHHC24Q6UX98 284 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 LINC00114Q6XXX2 140 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 RFX8Q6ZV50 586 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 RAB44Q7Z6P3 723 aaPredicted RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 IFT20Q8IY31 132 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 GLIS1Q8NBF1 620 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.07□□□□□ -1.12
SDF2-210ENST00000592250 PBXIP1Q96AQ6 731 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 RTP4Q96DX8 246 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 PRMT1Q99873 361 aaKnown RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 FAM118BQ9BPY3 351 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 APOL5Q9BWW9 433 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 NEUROG2Q9H2A3 272 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 CCSER2Q9H7U1 834 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 FAM204AQ9H8W3 233 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 ZDHHC18Q9NUE0 388 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 FAM86C1Q9NVL1 165 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 ZNF446Q9NWS9 450 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 HCFC1R1Q9NWW0 138 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 DTLQ9NZJ0 730 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 MARCH2Q9P0N8 246 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 COX16Q9P0S2 106 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 DNMT3BQ9UBC3 853 aaKnown RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 FEZ2Q9UHY8 353 aaPredicted RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 XPO7Q9UIA9 1087 aaKnown RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 MUTYHQ9UIF7 546 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 HBS1LQ9Y450 684 aaKnown RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 MFHAS1Q9Y4C4 1052 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 USP15Q9Y4E8 981 aaPredicted RBP8.07□□□□□ -1.12
SDF2-210ENST00000592250 SNX10Q9Y5X0 201 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 MYO7AQ13402 2215 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 NUP205Q92621 2012 aa8.07□□□□□ -1.12
SDF2-210ENST00000592250 ESYT3A0FGR9 886 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 BCLAF3A2AJT9 711 aaKnown RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 DRGXA6NNA5 263 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 H3BRJ5 948 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 GFRA2O00451 464 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 DAPK3O43293 454 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 COCHO43405 550 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 GREM1O60565 184 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 XYLBO75191 536 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 ECEL1O95672 775 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 RBP3P10745 1247 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 SLC2A3P11169 496 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 PTPN2P17706 415 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 ERCC2P18074 760 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 MCM3P25205 808 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 ARL4AP40617 200 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 MTHFRP42898 656 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 RPL21P46778 160 aaKnown RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 EPHB3P54753 998 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 TBX4P57082 545 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 DYNLT1P63172 113 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 GBE1Q04446 702 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 EFEMP1Q12805 493 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 CUL1Q13616 776 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 OCLNQ16625 522 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 PPP6R3Q5H9R7 873 aaPredicted RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 PRSS36Q5K4E3 855 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 ATAT1Q5SQI0 421 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 HECTD3Q5T447 861 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 TMEM164Q5U3C3 297 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 PIK3R6Q5UE93 754 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 AFMIDQ63HM1 303 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 CCDC70Q6NSX1 233 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 GAREM2Q75VX8 874 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 SND1Q7KZF4 910 aaKnown RBP eCLIP8.06□□□□□ -1.125e-8■■■■□ 20.1
SDF2-210ENST00000592250 GRASPQ7Z6J2 395 aaPredicted RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 C14orf80Q86SX3 495 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 NLRP14Q86W24 1093 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 DDX42Q86XP3 938 aaKnown RBP eCLIP8.06□□□□□ -1.12
SDF2-210ENST00000592250 UNC45BQ8IWX7 931 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 CCDC105Q8IYK2 499 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 ZSCAN18Q8TBC5 510 aaPredicted RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 GRK7Q8WTQ7 553 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 SMG7Q92540 1137 aaKnown RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 P3H4Q92791 437 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 AZIN2Q96A70 460 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 HAUS1Q96CS2 278 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 ZNF512Q96ME7 567 aaPredicted RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 CDK5RAP1Q96SZ6 601 aaKnown RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 MDFIQ99750 246 aa8.06□□□□□ -1.12
SDF2-210ENST00000592250 MAK16Q9BXY0 300 aaKnown RBP8.06□□□□□ -1.12
SDF2-210ENST00000592250 TXLNGYQ9BZA5 131 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms