RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ERMARDQ5T6L9 678 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 FAM72AQ5TYM5 149 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 FAM72DQ6L9T8 149 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 SARM1Q6SZW1 724 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 H2AFVQ71UI9 128 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 DGLUCYQ7Z3D6 616 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 FAM72BQ86X60 149 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 MMAAQ8IVH4 418 aaKnown RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 PYROXD2Q8N2H3 581 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 STK40Q8N2I9 435 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 DCAF4L2Q8NA75 395 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 OR52K2Q8NGK3 314 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 FNIP1Q8TF40 1166 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 OR8D1Q8WZ84 308 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 GPR174Q9BXC1 333 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 MAGEB5Q9BZ81 275 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 BTBD1Q9H0C5 482 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 ABHD10Q9NUJ1 306 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 GPATCH2LQ9NWQ4 482 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 IP6K2Q9UHH9 426 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 ANAPC7Q9UJX3 599 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 SCML1Q9UN30 329 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 AP4E1Q9UPM8 1137 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 MYO18AQ92614 2054 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SSU72P8A0A1W2PR75 194 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 FAM47DPA6NHR8 397 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 EEF2KO00418 725 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 KHNYNO15037 678 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ATP9BO43861 1147 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 RNASEH2AO75792 299 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 CFIP05156 583 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 CYP1A2P05177 515 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF806P0C7X5 589 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 MIPP30301 263 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SLC8A1P32418 973 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 PTGER3P43115 390 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 PSMD8P48556 350 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF75DP51815 510 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 GEMIN4P57678 1058 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SCAPQ12770 1279 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ELAVL3Q14576 367 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ACAP1Q15027 740 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 CST6Q15828 149 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SLC18A3Q16572 532 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 HADHQ16836 314 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 PPP6R3Q5H9R7 873 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ZFYVE27Q5T4F4 411 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 C9orf64Q5T6V5 341 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 FAM46CQ5VWP2 391 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 LINGO4Q6UY18 593 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SYT12Q8IV01 421 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SNX19Q92543 992 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 PTPRN2Q92932 1015 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ALG14Q96F25 216 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 HSPA12BQ96MM6 686 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 NUSAP1Q9BXS6 441 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 TRIM7Q9C029 511 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 MIR1-1HGQ9H1L0 117 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 RSPH9Q9H1X1 276 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 MAGEH1Q9H213 219 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 PABPC3Q9H361 631 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SMOC1Q9H4F8 434 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 ZWILCHQ9H900 591 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 NHEJ1Q9H9Q4 299 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 PARD6AQ9NPB6 346 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 DYRK4Q9NR20 520 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 TMEM248Q9NWD8 314 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 FBXL12Q9NXK8 326 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 WSB2Q9NYS7 404 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 USP36Q9P275 1121 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 VPS51Q9UID3 782 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 OR51B4Q9Y5P0 310 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.31□□□□□ -0.76
BRCA1-227ENST00000591849 SDK1Q7Z5N4 2213 aa10.31□□□□□ -0.76
BRCA1-227ENST00000591849 EPG5Q9HCE0 2579 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ACACBO00763 2458 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 TMEM110-MUSTN1A8MSY1 372 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 EIF3CLB5ME19 914 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 C1QTNF3-AMACRE9PGA6 284 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 H3BRJ5 948 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 MID1O15344 667 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 FGF10O15520 208 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 BUB1O43683 1085 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ADH1BP00325 375 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 SRCP12931 536 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 VAV1P15498 845 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 GNSP15586 552 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 C5AR1P21730 350 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ITPKAP23677 461 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 HTR7P34969 479 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 PCK1P35558 622 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ARL4AP40617 200 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 CLCN6P51797 869 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 CCDC15Q0P6D6 951 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 MAPK8IP2Q13387 824 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 KRT81Q14533 505 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 SF3A2Q15428 464 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms