RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TJP2Q9UDY2 1190 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 SLC12A6Q9UHW9 1150 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 MAN1B1Q9UKM7 699 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 FZD4Q9ULV1 537 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 TLR6Q9Y2C9 796 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 RAXQ9Y2V3 346 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 PCDHB4Q9Y5E5 795 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 PCDHGA1Q9Y5H4 931 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 A0A1B0GTQ1 180 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 EDDM13A0A1B0GTR0 161 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 TRABD2BA6NFA1 517 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 H0Y8X5 98 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 M0QYV0 167 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 TULP2O00295 520 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 BIN1O00499 593 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CAPN9O14815 690 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 PMM2O15305 246 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ST8SIA5O15466 376 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 MSI1O43347 362 aaKnown RBP9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CBFA2T2O43439 604 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 NDUFB5O43674 189 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 NRDCO43847 1150 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 RNASEH2AO75792 299 aaKnown RBP9.75□□□□□ -0.85
BRCA1-226ENST00000591534 LDOC1O95751 146 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-226ENST00000591534 GNA14O95837 355 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 IGLV3-27P01718 113 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 APOEP02649 317 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 JUPP14923 745 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CD70P32970 193 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 NUDT1P36639 197 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CSKP41240 450 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ACADSBP45954 432 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CCR5P51681 352 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ECT2LQ008S8 904 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 MYL5Q02045 173 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 SULT2A1Q06520 285 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 MTA1Q13330 715 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 SLC12A1Q13621 1099 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 MORC3Q14149 939 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CST6Q15828 149 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 COL28A1Q2UY09 1125 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CCDC157Q569K6 752 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 RFWD3Q6PCD5 774 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 BHLHA9Q7RTU4 235 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 DSG4Q86SJ6 1040 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 CARNMT1Q8N4J0 409 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ZNF366Q8N895 744 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 SLC35F5Q8WV83 523 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 NXPE2Q96DL1 559 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ELF4Q99607 663 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-226ENST00000591534 GRPEL1Q9HAV7 217 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 TIMMDC1Q9NPL8 285 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 AASDHPPTQ9NRN7 309 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ADAMTS1Q9UHI8 967 aa9.75□□□□□ -0.85
BRCA1-226ENST00000591534 ANKRD11Q6UB99 2663 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-226ENST00000591534 P4HA2O15460 535 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 MED7O43513 233 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 SIN3BO75182 1162 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 SLC2A3P11169 496 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 GOT1P17174 413 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 C5AR1P21730 350 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 MSX1P28360 303 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 CD38P28907 300 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 SLC8A1P32418 973 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 RGS7P49802 495 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 GALCP54803 685 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 CYP4F3Q08477 520 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 CCDC15Q0P6D6 951 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 LRMPQ12912 555 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 CCDC40Q4G0X9 1142 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 ANO6Q4KMQ2 910 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 FILIP1LQ4L180 1135 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 HS1BP3Q53T59 392 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 FAM133BQ5BKY9 247 aaKnown RBP9.74□□□□□ -0.85
BRCA1-226ENST00000591534 TTC39BQ5VTQ0 682 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-226ENST00000591534 PMF1Q6P1K2 205 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 NCEH1Q6PIU2 408 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 BEND5Q7L4P6 421 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 DHX40Q8IX18 779 aaKnown RBP9.74□□□□□ -0.85
BRCA1-226ENST00000591534 ZC3H3Q8IXZ2 948 aaKnown RBP9.74□□□□□ -0.85
BRCA1-226ENST00000591534 PPM1KQ8N3J5 372 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 ENOX1Q8TC92 643 aaKnown RBP9.74□□□□□ -0.85
BRCA1-226ENST00000591534 SLC35C1Q96A29 364 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 FAM149B1Q96BN6 582 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 LRIG1Q96JA1 1093 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 CEP63Q96MT8 703 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 MED15Q96RN5 788 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 FUCA2Q9BTY2 467 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 RBCK1Q9BYM8 510 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 ST7Q9NRC1 585 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 RWDD2AQ9UIY3 292 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 ERVW-1Q9UQF0 538 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 BTBD3Q9Y2F9 522 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 NBEAQ8NFP9 2946 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 ZFYVE26Q68DK2 2539 aa9.74□□□□□ -0.85
BRCA1-226ENST00000591534 A0A087WV48 116 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3DA0A087WVF3 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3IA0A087WXS9 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3EA0A087X179 549 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms