RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 PLEKHG6Q3KR16 790 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 NADSYN1Q6IA69 706 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 SCYL2Q6P3W7 929 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 TRMT11Q7Z4G4 463 aaKnown RBP23.82■■□□□ 1.4
LSM7-206ENST00000591515 LGI2Q8N0V4 545 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 CCDC112Q8NEF3 446 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 EIF3CQ99613 913 aaKnown RBP23.82■■□□□ 1.4
LSM7-206ENST00000591515 CD248Q9HCU0 757 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 ANAPC7Q9UJX3 599 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 EPN1Q9Y6I3 576 aaPredicted RBP23.82■■□□□ 1.4
LSM7-206ENST00000591515 KNL1Q8NG31 2342 aa23.82■■□□□ 1.4
LSM7-206ENST00000591515 GOLGA6L7A0A1B0GV03 622 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 TBC1D3BA6NDS4 549 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 TBL1XO60907 577 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 CBFA2T3O75081 653 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 LCA5LO95447 670 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 OXCT1P55809 520 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 HDAC4P56524 1084 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 EFHC2Q5JST6 749 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 RFWD3Q6PCD5 774 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 SLFN11Q7Z7L1 901 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 NAT16Q8N8M0 369 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 ZNF564Q8TBZ8 553 aaPredicted RBP23.81■■□□□ 1.4
LSM7-206ENST00000591515 KCNV2Q8TDN2 545 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 BHMTQ93088 406 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 SIK2Q9H0K1 926 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 CD93Q9NPY3 652 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 APOBEC2Q9Y235 224 aaKnown RBP23.81■■□□□ 1.4
LSM7-206ENST00000591515 CABIN1Q9Y6J0 2220 aa23.81■■□□□ 1.4
LSM7-206ENST00000591515 GFRA2O00451 464 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 NDUFA10O95299 355 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 NDUFV2P19404 249 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 SLC6A4P31645 630 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 ADRA1BP35368 520 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 GRIK2Q13002 908 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 GLRX5Q86SX6 157 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 RGL4Q8IZJ4 473 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 TERB1Q8NA31 727 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 ZNF419Q96HQ0 510 aaPredicted RBP23.8■■□□□ 1.4
LSM7-206ENST00000591515 RPRD1AQ96P16 312 aaPredicted RBP23.8■■□□□ 1.4
LSM7-206ENST00000591515 PPP1R9BQ96SB3 815 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 PLK2Q9NYY3 685 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 HS3ST4Q9Y661 456 aa23.8■■□□□ 1.4
LSM7-206ENST00000591515 EIF4E1BA6NMX2 242 aaKnown RBP23.79■■□□□ 1.4
LSM7-206ENST00000591515 PRPSAP2O60256 369 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 NTSR1P30989 418 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 KRT83P78385 493 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 CDH18Q13634 790 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 AUHQ13825 339 aaKnown RBP23.79■■□□□ 1.4
LSM7-206ENST00000591515 EGFLAMQ63HQ2 1017 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 MFN1Q8IWA4 741 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 ARHGEF26Q96DR7 871 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 ERLEC1Q96DZ1 483 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 PRMT1Q99873 361 aaKnown RBP23.79■■□□□ 1.4
LSM7-206ENST00000591515 PACSIN1Q9BY11 444 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 OSBPL2Q9H1P3 480 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 STIM2Q9P246 746 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 XPO7Q9UIA9 1087 aaKnown RBP23.79■■□□□ 1.4
LSM7-206ENST00000591515 PCOLCE2Q9UKZ9 415 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 SLC27A6Q9Y2P4 619 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 TMEM131Q92545 1883 aa23.79■■□□□ 1.4
LSM7-206ENST00000591515 SOWAHDA6NJG2 315 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 TRIM24O15164 1050 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 ZNF217O75362 1048 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 HOXD9P28356 352 aaPredicted RBP23.78■■□□□ 1.4
LSM7-206ENST00000591515 PCK1P35558 622 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 OGDHQ02218 1023 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 GSE1Q14687 1217 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 FBXL22Q6P050 247 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 NIPA2Q8N8Q9 360 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 WFIKKN2Q8TEU8 576 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 UCMAQ8WVF2 138 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 RFFLQ8WZ73 363 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 CALR3Q96L12 384 aaKnown RBP23.78■■□□□ 1.4
LSM7-206ENST00000591515 ACOX2Q99424 681 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 RETREG1Q9H6L5 497 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 CACNA2D2Q9NY47 1150 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 DKK4Q9UBT3 224 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 SUSD2Q9UGT4 822 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 FBXO10Q9UK96 956 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 VANGL2Q9ULK5 521 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 PCDHA13Q9Y5I0 950 aa23.78■■□□□ 1.4
LSM7-206ENST00000591515 A0A1B0GVM2 712 aa23.77■■□□□ 1.4
LSM7-206ENST00000591515 TCAF2A6NFQ2 919 aa23.77■■□□□ 1.4
LSM7-206ENST00000591515 MAOBP27338 520 aa23.77■■□□□ 1.4
LSM7-206ENST00000591515 NRG1Q02297 640 aaPredicted RBP23.77■■□□□ 1.4
LSM7-206ENST00000591515 ANKS1BQ7Z6G8 1248 aa23.77■■□□□ 1.4
LSM7-206ENST00000591515 PSTKQ8IV42 348 aaKnown RBP23.77■■□□□ 1.4
LSM7-206ENST00000591515 CRELD1Q96HD1 420 aa23.77■■□□□ 1.4
LSM7-206ENST00000591515 PRICKLE1Q96MT3 831 aaPredicted RBP23.77■■□□□ 1.4
LSM7-206ENST00000591515 SLC6A17Q9H1V8 727 aa23.77■■□□□ 1.4
LSM7-206ENST00000591515 CLDN11O75508 207 aa23.76■■□□□ 1.39
LSM7-206ENST00000591515 LUC7L3O95232 432 aaKnown RBP23.76■■□□□ 1.39
LSM7-206ENST00000591515 MOCS3O95396 460 aa23.76■■□□□ 1.39
LSM7-206ENST00000591515 ARHGAP25P42331 645 aa23.76■■□□□ 1.39
LSM7-206ENST00000591515 ZNF135P52742 658 aaPredicted RBP23.76■■□□□ 1.39
LSM7-206ENST00000591515 RPS24P62847 133 aaKnown RBP23.76■■□□□ 1.39
LSM7-206ENST00000591515 EIF4HQ15056 248 aaKnown RBP23.76■■□□□ 1.39
LSM7-206ENST00000591515 HADHQ16836 314 aaKnown RBP23.76■■□□□ 1.39
LSM7-206ENST00000591515 CHST9Q7L1S5 443 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms