RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 CSE1LP55060 971 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 CERCAMQ5T4B2 595 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 PTRHD1Q6GMV3 140 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 LRRC52Q8N7C0 313 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 RIN3Q8TB24 985 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 MCRS1Q96EZ8 462 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ZNF512Q96ME7 567 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ASPSCR1Q9BZE9 553 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 LIPMQ5VYY2 423 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ZDHHC14Q8IZN3 488 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 RP9Q8TA86 221 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 DLG3Q92796 817 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 CDCA5Q96FF9 252 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 SYT11Q9BT88 431 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 NXF3Q9H4D5 531 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 PIF1Q9H611 641 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 RGS18Q9NS28 235 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 DNAJB2P25686 324 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 ABHD16BQ9H3Z7 469 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 LATS2Q9NRM7 1088 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 MLNP12872 115 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 SP100P23497 879 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 CCNHP51946 323 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 FOLH1Q04609 750 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 ZNF570Q96NI8 536 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 MID1IP1Q9NPA3 183 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 NUDT5Q9UKK9 219 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 DSEQ9UL01 958 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 GPD2P43304 727 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 SNRNP27Q8WVK2 155 aaKnown RBP17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 DPEP3Q9H4B8 488 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 WDR55Q9H6Y2 383 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 DMAP1Q9NPF5 467 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 FAM8A1Q9UBU6 413 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 CDH22Q9UJ99 828 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 ENTPD7Q9NQZ7 604 aa17.4■□□□□ 0.38
SMARCA4-215ENST00000590574 C2orf81A6NN90 581 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 PSMD12O00232 456 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 ATXN1P54253 815 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 CTBP1Q13363 440 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 PEX6Q13608 980 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 ILDR2Q71H61 639 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 LPCAT2Q7L5N7 544 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 RMND5BQ96G75 393 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 DUSP16Q9BY84 665 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 TRIM54Q9BYV2 358 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 DNAJC28Q9NX36 388 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 CXorf49A8MYA2 514 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 OVOS1Q6IE37 1185 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 TLK2Q86UE8 772 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 LZTR1Q8N653 840 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 CMASQ8NFW8 434 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 FBXO32Q969P5 355 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 XPR1Q9UBH6 696 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 STX7O15400 261 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 MPSTP25325 297 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 MSX2P35548 267 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 MPP5Q8N3R9 675 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 TWNKQ96RR1 684 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 KCTD14Q9BQ13 255 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 RTKNQ9BST9 563 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 ZCWPW1Q9H0M4 648 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 RAB10P61026 200 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 SNX17Q15036 470 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 GAD1Q99259 594 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 NDNQ99608 321 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC25A23Q9BV35 468 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 EPB41L4BQ9H329 900 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 CASS4Q9NQ75 786 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 NENFQ9UMX5 172 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 AP4S1Q9Y587 144 aa17.39■□□□□ 0.37
SMARCA4-215ENST00000590574 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SMIM10L2AP0DMW4 78 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SMIM10L2BP0DMW5 78 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 RENBPP51606 427 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 INSCQ1MX18 579 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 EBF4Q9BQW3 602 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 GPR63Q9BZJ6 419 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 GOLGA2P5Q9HBQ8 144 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 CRYL1Q9Y2S2 319 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 PEX1O43933 1283 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 VPS26AO75436 327 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 METTL18O95568 372 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 HARS2P49590 506 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 ROR2Q01974 943 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 KLF10Q13118 480 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 PPP1R10Q96QC0 940 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 HERPUD2Q9BSE4 406 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 THUMPD3Q9BV44 507 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 BLOC1S6Q9UL45 172 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms