RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 RWDD2BP57060 319 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 SERPINA13PQ6UXR4 307 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 SPOCD1Q6ZMY3 1216 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 CCDC50Q8IVM0 306 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 NPWQ8N729 165 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 PQLC3Q8N755 202 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-214ENST00000590556 UBE2Q2Q8WVN8 375 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 HMCESQ96FZ2 354 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 RPL10LQ96L21 214 aaKnown RBP19.59■□□□□ 0.73
DDX39A-214ENST00000590556 SLC39A8Q9C0K1 460 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 LRRC19Q9H756 370 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 VPS51Q9UID3 782 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 MMP17Q9ULZ9 603 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 ARHGAP42A6NI28 874 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 WASH3PC4AMC7 463 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 ADAM23O75077 832 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 ZMPSTE24O75844 475 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 GLDCP23378 1020 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 SERPINB6P35237 376 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 NNMTP40261 264 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 CDKN2BP42772 138 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 STK19P49842 368 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-214ENST00000590556 AFMIDQ63HM1 303 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 MAMSTRQ6ZN01 415 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 SYT13Q7L8C5 426 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 RFX6Q8HWS3 928 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 ARHGAP12Q8IWW6 846 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 KDM1BQ8NB78 822 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 ALG3Q92685 438 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 HES6Q96HZ4 224 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 MRGPRX3Q96LB0 322 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 PRDM16Q9HAZ2 1276 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 SLCO3A1Q9UIG8 710 aa19.58■□□□□ 0.72
DDX39A-214ENST00000590556 GOLGA6L9A6NEM1 432 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 DFFAO00273 331 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 DDX3YO15523 660 aaKnown RBP19.57■□□□□ 0.72
DDX39A-214ENST00000590556 KDELR3O43731 214 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 HOXB2P14652 356 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 CXCL12P48061 93 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 PAPOLAP51003 745 aaKnown RBP19.57■□□□□ 0.72
DDX39A-214ENST00000590556 CCR3P51677 355 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 SERINC3Q13530 473 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 ENPP2Q13822 863 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 PAFAH1B3Q15102 231 aaKnown RBP19.57■□□□□ 0.72
DDX39A-214ENST00000590556 TAZQ16635 292 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 TFDP3Q5H9I0 405 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 NCBP2-AS2Q69YL0 99 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 RETSATQ6NUM9 610 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 LINGO4Q6UY18 593 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 NETO2Q8NC67 525 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 GABRG3Q99928 467 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 TMEM245Q9H330 911 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 POLR3BQ9NW08 1133 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-214ENST00000590556 C2orf42Q9NWW7 574 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 SLC8A2Q9UPR5 921 aa19.57■□□□□ 0.72
DDX39A-214ENST00000590556 KMT2EQ8IZD2 1858 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 CACNA1IQ9P0X4 2223 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 USP27XA6NNY8 438 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 APOL1O14791 398 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 LAMTOR5O43504 91 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 EPHX1P07099 455 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 KRT10P13645 584 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 HLA-EP13747 358 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 ZFXP17010 805 aaPredicted RBP19.56■□□□□ 0.72
DDX39A-214ENST00000590556 PRKCHP24723 683 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 CETN2P41208 172 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 VASPP50552 380 aaPredicted RBP19.56■□□□□ 0.72
DDX39A-214ENST00000590556 DNA2P51530 1060 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 COPS2P61201 443 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 ARF5P84085 180 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 SATB1Q01826 763 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 SLC20A2Q08357 652 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 LLGL1Q15334 1064 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 MEI1Q5TIA1 1274 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 KAZNQ674X7 775 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 C1orf210Q8IVY1 113 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 ATP11CQ8NB49 1132 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 MYO19Q96H55 970 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 SUN2Q9UH99 717 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 HS3ST2Q9Y278 367 aa19.56■□□□□ 0.72
DDX39A-214ENST00000590556 MUC22E2RYF6 1773 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-214ENST00000590556 hCG_1818297A0A087WSY0 165 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 ZSCAN5CA6NGD5 496 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-214ENST00000590556 TTC34A8MYJ7 566 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 MFSD11O43934 449 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 KIF5CO60282 957 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 SYNCRIPO60506 623 aaKnown RBP19.55■□□□□ 0.72
DDX39A-214ENST00000590556 MT-CO1P00395 513 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 PYGMP11217 842 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 DGKEP52429 567 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 GEMIN4P57678 1058 aaKnown RBP19.55■□□□□ 0.72
DDX39A-214ENST00000590556 DYNLT1P63172 113 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 TFDP2Q14188 446 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 STARD3Q14849 445 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 RPS6KA1Q15418 735 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 CRY1Q16526 586 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 PPP2R5EQ16537 467 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 ACCSLQ4AC99 568 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 SLC9A4Q6AI14 798 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms