RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 FAM72CH0Y354 149 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 CBX4O00257 560 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 ATP9BO43861 1147 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 RNASEH2AO75792 299 aaKnown RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 LRIG2O94898 1065 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 FSBPO95073 299 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 ENGP17813 658 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 PSMA2P25787 234 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 PBX1P40424 430 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 ZBED6P86452 979 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 FOXK2Q01167 660 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 GNA12Q03113 381 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 EFHC2Q5JST6 749 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 FAM72AQ5TYM5 149 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 PEAR1Q5VY43 1037 aaPredicted RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 FAM72DQ6L9T8 149 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 LINGO4Q6UY18 593 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 DSG4Q86SJ6 1040 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 FAM72BQ86X60 149 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 HDDC3Q8N4P3 179 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 FRS2Q8WU20 508 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 DNASE2BQ8WZ79 361 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 OR8D1Q8WZ84 308 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D31Q96DN5 1066 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 PSMB7Q99436 277 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 XPO4Q9C0E2 1151 aaKnown RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 NEUROG2Q9H2A3 272 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 ATP13A1Q9HD20 1204 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 MYO1AQ9UBC5 1043 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 CNOT8Q9UFF9 292 aaKnown RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 VPS51Q9UID3 782 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
TPM4-212ENST00000590180 A0A1B0GTW7 788 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 K7ERQ8 282 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 CDX4O14627 284 aaPredicted RBP12.37□□□□□ -0.43
TPM4-212ENST00000590180 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
TPM4-212ENST00000590180 CREB3O43889 395 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ADH1BP00325 375 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 SYPP08247 313 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 C7P10643 843 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 SRCP12931 536 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 RHOQP17081 205 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 GOT1P17174 413 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 C5AR1P21730 350 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 GLDCP23378 1020 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
TPM4-212ENST00000590180 DNA2P51530 1060 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 OGDHQ02218 1023 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 NRG1Q02297 640 aaPredicted RBP12.37□□□□□ -0.43
TPM4-212ENST00000590180 FAM46CQ5VWP2 391 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 PLEKHA7Q6IQ23 1121 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 RETSATQ6NUM9 610 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ZNF783Q6ZMS7 281 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 Q6ZVU0 165 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 PYROXD2Q8N2H3 581 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
TPM4-212ENST00000590180 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 SYN2Q92777 582 aaPredicted RBP12.37□□□□□ -0.43
TPM4-212ENST00000590180 NTAN1Q96AB6 310 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ZNF653Q96CK0 615 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 SERGEFQ9UGK8 458 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.436e-11■■■□□ 18.3
TPM4-212ENST00000590180 CEP192Q8TEP8 1941 aa12.37□□□□□ -0.43
TPM4-212ENST00000590180 TMEM191CA6NGB0 347 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 LRRC72A6NJI9 287 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 MCF2LO15068 1137 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 SMAD6O43541 496 aaKnown RBP12.36□□□□□ -0.43
TPM4-212ENST00000590180 RNF8O76064 485 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 SERPING1P05155 500 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 EPHB2P29323 1055 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 CASP14P31944 242 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 L1CAMP32004 1257 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 ACVRL1P37023 503 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 RECQLP46063 649 aaPredicted RBP12.36□□□□□ -0.43
TPM4-212ENST00000590180 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 GALCP54803 685 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 SLC20A2Q08357 652 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 POM121L1PQ3SYA9 428 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 PPM1JQ5JR12 505 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 ARTNQ5T4W7 220 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 DCAF4L2Q8NA75 395 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 OR14C36Q8NHC7 312 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms