RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ITGAVP06756 1048 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 HMBSP08397 361 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 RALAP11233 206 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 PFKLP17858 780 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 PAMP19021 973 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 DRD1P21728 446 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 ATP5C1P36542 298 aaKnown RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 ERVFRD-1P60508 538 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 YWHAEP62258 255 aaKnown RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 LRRC63Q05C16 580 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 KDSRQ06136 332 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 DMWDQ09019 674 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 SRSF5Q13243 272 aaKnown RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 NFIL3Q16649 462 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 C1orf220Q5T0J3 134 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 ZNF227Q86WZ6 799 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 MIB1Q86YT6 1006 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 CRYBG2Q8N1P7 616 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 SYNPOQ8N3V7 929 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 CCDC33Q8N5R6 958 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 RPLP0P6Q8NHW5 317 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 SEMA4DQ92854 862 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 TMEM176AQ96HP8 235 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 DHTKD1Q96HY7 919 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 TIGD1Q96MW7 591 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 TWNKQ96RR1 684 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 SMOQ99835 787 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 TTLL2Q9BWV7 592 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 ZNF552Q9H707 407 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 METTL14Q9HCE5 456 aaKnown RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 CISHQ9NSE2 258 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 TMEM30AQ9NV96 361 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 TBC1D14Q9P2M4 693 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 HESX1Q9UBX0 185 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 LSM7Q9UK45 103 aaKnown RBP8.64□□□□□ -1.03
DNMT1-219ENST00000589349 NUDT5Q9UKK9 219 aa8.64□□□□□ -1.03
DNMT1-219ENST00000589349 A0A1W2PQJ5 194 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TBC1D3BA6NDS4 549 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 SHISA7A6NL88 538 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 HRKO00198 91 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TRDMT1O14717 391 aaKnown RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 SLC16A3O15427 465 aaKnown RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TLR5O60602 858 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 FGFR1OPO95684 399 aaKnown RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TBX18O95935 607 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 APODP05090 189 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 MPOP05164 745 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 PPP1R2P41236 205 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 ID4P47928 161 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 SLC7A9P82251 487 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 DHCR24Q15392 516 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 GOLGA7BQ2TAP0 167 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 CBWD6Q4V339 395 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TMEM196Q5HYL7 178 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 CBWD3Q5JTY5 395 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 CBWD5Q5RIA9 395 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TPGS1Q6ZTW0 290 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 PAQR9Q6ZVX9 377 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 ZNF605Q86T29 641 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TADA2BQ86TJ2 420 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 LONP2Q86WA8 852 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 PPM1KQ8N3J5 372 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 TTC39CQ8N584 583 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 ENGASEQ8NFI3 743 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 CCDC26Q8TAB7 109 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 UBA3Q8TBC4 463 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 OVCA2Q8WZ82 227 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 ERLEC1Q96DZ1 483 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 IPO9Q96P70 1041 aaKnown RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 HNRNPABQ99729 332 aaKnown RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 LRRC4Q9HBW1 653 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 FBRSL1Q9HCM7 1045 aaKnown RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 PRMT8Q9NR22 394 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 ARHGEF4Q9NR80 690 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 POLR3BQ9NW08 1133 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 COMMD8Q9NX08 183 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 RASAL2Q9UJF2 1139 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 INVSQ9Y283 1065 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 PCDHB4Q9Y5E5 795 aa8.63□□□□□ -1.03
DNMT1-219ENST00000589349 PTPRZ1P23471 2315 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-219ENST00000589349 ZFHX2Q9C0A1 2572 aaPredicted RBP8.62□□□□□ -1.03
DNMT1-219ENST00000589349 NEDD8-MDP1E9PL57 170 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 PES1O00541 588 aaKnown RBP8.62□□□□□ -1.03
DNMT1-219ENST00000589349 MDM4O15151 490 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 OAS1P00973 400 aaKnown RBP8.62□□□□□ -1.03
DNMT1-219ENST00000589349 RARGP13631 454 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 KRT5P13647 590 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 LCP1P13796 627 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 USP8P40818 1118 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 SLC6A11P48066 632 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 DGKEP52429 567 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 GAD2Q05329 585 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 EFEMP1Q12805 493 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 PAK1Q13153 545 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 CUL2Q13617 745 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 FBXO43Q4G163 708 aa8.62□□□□□ -1.03
DNMT1-219ENST00000589349 ZCWPW2Q504Y3 356 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms