RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 FAM83CQ9BQN1 747 aa14.83□□□□□ -0.04
NPC1-207ENST00000588867 KIAA1522Q9P206 1035 aaPredicted RBP14.83□□□□□ -0.04
NPC1-207ENST00000588867 EPS15L1Q9UBC2 864 aa14.83□□□□□ -0.04
NPC1-207ENST00000588867 VPS28Q9UK41 221 aa14.83□□□□□ -0.04
NPC1-207ENST00000588867 HPCAL4Q9UM19 191 aa14.83□□□□□ -0.04
NPC1-207ENST00000588867 NEU2Q9Y3R4 380 aa14.83□□□□□ -0.04
NPC1-207ENST00000588867 NUMBLQ9Y6R0 609 aa14.83□□□□□ -0.04
NPC1-207ENST00000588867 TARSL2A2RTX5 802 aaKnown RBP14.82□□□□□ -0.04
NPC1-207ENST00000588867 CBX4O00257 560 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ECI2O75521 394 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ADH1CP00326 375 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ADH5P11766 374 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 GDI1P31150 447 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 RPL22P35268 128 aaKnown RBP14.82□□□□□ -0.04
NPC1-207ENST00000588867 CLCN6P51797 869 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 OXCT1P55809 520 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 GAD2Q05329 585 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 FCHO2Q0JRZ9 810 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 GPS1Q13098 491 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 PDGFRLQ15198 375 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 TRADDQ15628 312 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 TTC8Q8TAM2 541 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 IFT81Q8WYA0 676 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 PNKPQ96T60 521 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 FEM1AQ9BSK4 669 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 PCDH9Q9HC56 1237 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 XIRP2A4UGR9 3374 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 MATN3O15232 486 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 MTSS1O43312 755 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 NEBLO76041 1014 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 JCHAINP01591 159 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 CCNB1P14635 433 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 GLDCP23378 1020 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 CD70P32970 193 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ETFBP38117 255 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ZNF33AQ06730 810 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 WASHC5Q12768 1159 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 LMAN2Q12907 356 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ANKRD20A2Q5SQ80 823 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ANKRD20A1Q5TYW2 823 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ANKRD20A3Q5VUR7 823 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 DUPD1Q68J44 220 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ZNF783Q6ZMS7 281 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 PID1Q7Z2X4 250 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 IFT20Q8IY31 132 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 CCHCR1Q8TD31 782 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 NSMCE1Q8WV22 266 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 AGAP3Q96P47 875 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 TRMT61BQ9BVS5 477 aaKnown RBP14.82□□□□□ -0.04
NPC1-207ENST00000588867 PARD6BQ9BYG5 372 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ECT2Q9H8V3 914 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 ABCB8Q9NUT2 735 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 MARK1Q9P0L2 795 aa14.82□□□□□ -0.04
NPC1-207ENST00000588867 KLHL8Q9P2G9 620 aaPredicted RBP14.82□□□□□ -0.04
NPC1-207ENST00000588867 C5orf60A6NFR6 353 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 OTOL1A6NHN0 477 aaPredicted RBP14.81□□□□□ -0.04
NPC1-207ENST00000588867 C2CD4DB7Z1M9 353 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 KDELR3O43731 214 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 GCATO75600 419 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 PTPN3P26045 913 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 RPL21P46778 160 aaKnown RBP14.81□□□□□ -0.04
NPC1-207ENST00000588867 IL10RBQ08334 325 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 P3H1Q32P28 736 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 ARHGEF18Q6ZSZ5 1173 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 APCDD1Q8J025 514 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 RTP4Q96DX8 246 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 XPO6Q96QU8 1125 aaKnown RBP14.81□□□□□ -0.04
NPC1-207ENST00000588867 TTLL3Q9Y4R7 772 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 EYSQ5T1H1 3165 aa14.81□□□□□ -0.04
NPC1-207ENST00000588867 A0A0A0MRY4 1105 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 PRAMEF11O60813 436 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 ZNF189O75820 626 aaPredicted RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 HLA-FP30511 346 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 ZBTB17Q13105 803 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 NR1H3Q13133 447 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 HTR4Q13639 388 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 RUNX3Q13761 415 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 TEX44Q53QW1 395 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 ZNF567Q8N184 647 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.8□□□□□ -0.04
NPC1-207ENST00000588867 LRRC45Q96CN5 670 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 SPATA13Q96N96 652 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 PHF7Q9BWX1 381 aaPredicted RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 ACE2Q9BYF1 805 aaPredicted RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 HPS4Q9NQG7 708 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 RBM22Q9NW64 420 aaKnown RBP eCLIP14.8□□□□□ -0.04
NPC1-207ENST00000588867 GTSE1Q9NYZ3 720 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 PAK5Q9P286 719 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 LIMD1Q9UGP4 676 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 CHD5Q8TDI0 1954 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 F5H423 210 aaPredicted RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 CHADO15335 359 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 SNAP91O60641 907 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 SLC10A7Q0GE19 358 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 MARC1Q5VT66 337 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 RNF43Q68DV7 783 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 PTCRAQ6ISU1 281 aaPredicted RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 CPA6Q8N4T0 437 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms