RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 VTI1BQ9UEU0 232 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 TLK1Q9UKI8 766 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 CDH9Q9ULB4 789 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 SSX2IPQ9Y2D8 614 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 AAR2Q9Y312 384 aaKnown RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 NME7Q9Y5B8 376 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 C17orf102A2RUQ5 167 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 MAGEA13PA6NCF6 341 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 DYNC1LI2O43237 492 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 MAP3K6O95382 1288 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 ALDOAP04075 364 aaKnown RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 TFE3P19532 575 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 C1orf146Q5VVC0 180 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 RFWD3Q6PCD5 774 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 METTL23Q86XA0 190 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 MYLK4Q86YV6 388 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 LRRC49Q8IUZ0 686 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 LZTR1Q8N653 840 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 RBM15BQ8NDT2 890 aaKnown RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 SLC7A14Q8TBB6 771 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 PTCD2Q8WV60 388 aaKnown RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 SCG3Q8WXD2 468 aaKnown RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 KCNK16Q96T55 309 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 SERPINI1Q99574 410 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 ZNF184Q99676 751 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 THTPAQ9BU02 230 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 CHST12Q9NRB3 414 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 NMRK1Q9NWW6 199 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 SYBUQ9NX95 663 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 HACD3Q9P035 362 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
NEDD4L-223ENST00000588516 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 TRIM43BA6NCK2 446 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 HAS3O00219 553 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 CCNT2O60583 730 aaKnown RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 TRIM13O60858 407 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 KRT36O76013 467 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ANXA9O76027 345 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 HSPA4LO95757 839 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 KITP10721 976 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ERCC2P18074 760 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 AKAP5P24588 427 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 PTPN3P26045 913 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 DAOAP59103 153 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 RPL10AP62906 217 aaKnown RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 KDSRQ06136 332 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 GALNT2Q10471 571 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 CDH17Q12864 832 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 NME3Q13232 169 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 PCLAFQ15004 111 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 CCDC85BQ15834 202 aaPredicted RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ANO4Q32M45 955 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ANKRD20A4Q4UJ75 823 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 DCLRE1AQ6PJP8 1040 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 CLEC20AQ6ZU45 233 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 STRA8Q7Z7C7 330 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 TTC7BQ86TV6 843 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 TRIM43Q96BQ3 446 aaPredicted RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ZNF669Q96BR6 464 aaPredicted RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 TIFAQ96CG3 184 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 TSGA13Q96PP4 275 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ILKAPQ9H0C8 392 aaPredicted RBP14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 OSBPL2Q9H1P3 480 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 SNX15Q9NRS6 342 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 FLRT1Q9NZU1 646 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ARMCX1Q9P291 453 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 PDP2Q9P2J9 529 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 DSEQ9UL01 958 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 ARHGAP26Q9UNA1 814 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 IPPQ9Y573 584 aa14.32□□□□□ -0.12
NEDD4L-223ENST00000588516 MYO9BQ13459 2157 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 SPTLC1O15269 473 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 AP1G2O75843 785 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 LTFP02788 710 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 THRAP10827 490 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 ANPEPP15144 967 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 SERPINB5P36952 375 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 GRIA1P42261 906 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 CLCN2P51788 898 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 ATXN1P54253 815 aaKnown RBP14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 TMEM62Q0P6H9 643 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 SEMA3BQ13214 749 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 MAPRE1Q15691 268 aaKnown RBP14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 RAB41Q5JT25 222 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 RABGAP1LQ5R372 815 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 UBXN11Q5T124 520 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 TREML1Q86YW5 311 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 C10orf107Q8IVU9 208 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 PYROXD2Q8N2H3 581 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 TMEM130Q8N3G9 435 aa14.31□□□□□ -0.12
NEDD4L-223ENST00000588516 AFAP1L2Q8N4X5 818 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms