RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NRGNQ92686 78 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 MTFMTQ96DP5 389 aaKnown RBP7.15□□□□□ -1.26
TPM4-210ENST00000588507 TBATAQ96M53 351 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 SYT15Q9BQS2 421 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 ARHGAP28Q9P2N2 729 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 TNFRSF10DQ9UBN6 386 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 ZBTB47Q9UFB7 747 aaPredicted RBP7.15□□□□□ -1.26
TPM4-210ENST00000588507 APOBEC3BQ9UH17 382 aaKnown RBP7.15□□□□□ -1.26
TPM4-210ENST00000588507 USP25Q9UHP3 1055 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 GGA2Q9UJY4 613 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 CDH9Q9ULB4 789 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 DOLKQ9UPQ8 538 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 NTNG1Q9Y2I2 539 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 RBM19Q9Y4C8 960 aaKnown RBP7.15□□□□□ -1.26
TPM4-210ENST00000588507 HS3ST3A1Q9Y663 406 aa7.15□□□□□ -1.26
TPM4-210ENST00000588507 AKAP6Q13023 2319 aa7.15□□□□□ -1.27
TPM4-210ENST00000588507 VPS13CQ709C8 3753 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 B4E171 279 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 ZBTB43O43298 467 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 PABPC1P11940 636 aaKnown RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 EDN3P14138 238 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 PNLIPP16233 465 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 GCFC2P16383 781 aaKnown RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 MAN1A1P33908 653 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 RBMXP38159 391 aaKnown RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 TSPAN7P41732 249 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 GLRBP48167 497 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 VAMP7P51809 220 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 THOP1P52888 689 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 PSMC1P62191 440 aaKnown RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 Q0VFX4 171 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 CHAF1BQ13112 559 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 TRA2AQ13595 282 aaKnown RBP eCLIP7.14□□□□□ -1.27
TPM4-210ENST00000588507 DSG2Q14126 1118 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 ASIC2Q16515 512 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 CPZQ66K79 652 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 HMBOX1Q6NT76 420 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 ZPBP2Q6X784 338 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 SPRED1Q7Z699 444 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 CNTRLQ7Z7A1 2325 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 KIAA0907Q7Z7F0 614 aaPredicted RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 RBFAQ8N0V3 343 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.14□□□□□ -1.271e-6■■■□□ 19.1
TPM4-210ENST00000588507 RTP4Q96DX8 246 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 MYO19Q96H55 970 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 CCDC120Q96HB5 630 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 PCED1BQ96HM7 432 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 BMFQ96LC9 184 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 ALPK1Q96QP1 1244 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 LARP6Q9BRS8 491 aaKnown RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 LRRC2Q9BYS8 371 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 HAPLN2Q9GZV7 340 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 TCEAL2Q9H3H9 227 aaPredicted RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 CRTAC1Q9NQ79 661 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 FOXD4L1Q9NU39 408 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 ABCB8Q9NUT2 735 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 TMEM63CQ9P1W3 806 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 B3GNT3Q9Y2A9 372 aa7.14□□□□□ -1.27
TPM4-210ENST00000588507 TMEM184BQ9Y519 407 aaPredicted RBP7.14□□□□□ -1.27
TPM4-210ENST00000588507 IGHV5-10-1A0A0J9YXX1 117 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 EDDM13A0A1B0GTR0 161 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 A0A1W2PQU0 124 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 SERINC4A6NH21 518 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 GOLGA8AA7E2F4 631 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 GOLGA8BA8MQT2 603 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 E2F3O00716 465 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 CREG1O75629 220 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 STC2O76061 302 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 STK17BO94768 372 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 CPNE6O95741 557 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 KLKB1P03952 638 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 TSHRP16473 764 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 PTPN1P18031 435 aaKnown RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 MZF1P28698 734 aaPredicted RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 CDC27P30260 824 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 CSNK1G2P78368 415 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 EIF2B5Q13144 721 aaKnown RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 PDE1CQ14123 709 aaPredicted RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 MAP7Q14244 749 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 ZNF284Q2VY69 593 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 PDLIM3Q53GG5 364 aaPredicted RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 NEK5Q6P3R8 708 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 PODNL1Q6PEZ8 512 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 BHLHB9Q6PI77 547 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 LVRNQ6Q4G3 990 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 KYAT3Q6YP21 454 aaKnown RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 MEX3BQ6ZN04 569 aaKnown RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 ZNF765Q7L2R6 523 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 LYSMD3Q7Z3D4 306 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 TMEM200AQ86VY9 491 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 PHACTR4Q8IZ21 702 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 STK40Q8N2I9 435 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 SCAMP5Q8TAC9 235 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 THAP4Q8WY91 577 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 CCDC74BQ96LY2 380 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 ZPBPQ9BS86 351 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 LRRC61Q9BV99 259 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 SPRTNQ9H040 489 aaPredicted RBP7.13□□□□□ -1.27
TPM4-210ENST00000588507 CLPBQ9H078 707 aa7.13□□□□□ -1.27
TPM4-210ENST00000588507 ILKAPQ9H0C8 392 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms