RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MT-CO1P00395 513 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 CXCR5P32302 372 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 PTPN7P35236 360 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 SERPINB6P35237 376 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 ARF5P84085 180 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 ECT2LQ008S8 904 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 SERINC3Q13530 473 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF234Q14588 700 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 EIF4HQ15056 248 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 PARP15Q460N3 678 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 FBXO43Q4G163 708 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 LINGO4Q6UY18 593 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 LEKR1Q6ZMV7 388 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF354CQ86Y25 554 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF513Q8N8E2 541 aaPredicted RBP10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 DCAF4L2Q8NA75 395 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 IL17RCQ8NAC3 791 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 RPLP0P6Q8NHW5 317 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 PBXIP1Q96AQ6 731 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 CLDN23Q96B33 292 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 RPL10LQ96L21 214 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 OSBPL6Q9BZF3 934 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 C11orf16Q9NQ32 467 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 C2orf42Q9NWW7 574 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 DONSONQ9NYP3 566 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 DTLQ9NZJ0 730 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 THAP10Q9P2Z0 257 aaPredicted RBP10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 SAE1Q9UBE0 346 aaPredicted RBP10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 SLCO3A1Q9UIG8 710 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 ERVW-1Q9UQF0 538 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 MUC22E2RYF6 1773 aaPredicted RBP10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 TCRBV7S2A1N4TA0A589 114 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ARHGAP42A6NI28 874 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 K7ERQ8 282 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 KDELR3O43731 214 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ADAM23O75077 832 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 KLF8O95600 359 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ATP5BP06576 529 aaKnown RBP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 DLDP09622 509 aaKnown RBP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 HLA-EP13747 358 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 HNRNPLP14866 589 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 PECAM1P16284 738 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 AOC1P19801 751 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 IL12RB1P42701 662 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 WASP42768 502 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 MRPS21P82921 87 aaKnown RBP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 SULT2A1Q06520 285 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 TFDP2Q14188 446 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 LRRC32Q14392 662 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 FAM182AQ5T1J6 154 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 BBS12Q6ZW61 710 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 B4GALNT4Q76KP1 1039 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ALLCQ8N6M5 410 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF366Q8N895 744 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 UCMAQ8WVF2 138 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ACDQ96AP0 544 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 HAUS1Q96CS2 278 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 ERLEC1Q96DZ1 483 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 C2orf49Q9BVC5 232 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 CARD9Q9H257 536 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 MTG2Q9H4K7 406 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 PRDM16Q9HAZ2 1276 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 CACNA2D2Q9NY47 1150 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 EFR3BQ9Y2G0 817 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 HEY1Q9Y5J3 304 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 TRIOO75962 3097 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 TTC28Q96AY4 2481 aa10.94□□□□□ -0.66
SMARCA4-213ENST00000587988 TTC34A8MYJ7 566 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SGK1O00141 431 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 NCAM2O15394 837 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SMAD6O43541 496 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 MAFKO60675 156 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 PRAMEF11O60813 436 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 ASLP04424 464 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SRPRAP08240 638 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SRCP12931 536 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 ZFXP17010 805 aaPredicted RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 TGM2P21980 687 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 PRKCHP24723 683 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 ETFBP38117 255 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 CETN2P41208 172 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 GARSP41250 739 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 RPS9P46781 194 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 CLCN5P51795 746 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 GALNT2Q10471 571 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 KLF1Q13351 362 aaPredicted RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 FNDC3BQ53EP0 1204 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SEL1L2Q5TEA6 688 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 NYAP1Q6ZVC0 841 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 BMP8AQ7Z5Y6 402 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SLC13A5Q86YT5 568 aaPredicted RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 CHPFQ8IZ52 775 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SYNPOQ8N3V7 929 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SH2D3CQ8N5H7 860 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 TMEM105Q8N8V8 129 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 TXNDC5Q8NBS9 432 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms