RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 CNTN1Q12860 1018 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 TRPC3Q13507 836 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 MPP7Q5T2T1 576 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 TMEM164Q5U3C3 297 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 RNF219Q5W0B1 726 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 SCARA5Q6ZMJ2 495 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 TIPARPQ7Z3E1 657 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 NKD1Q969G9 470 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 CMKLR1Q99788 373 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 EPAS1Q99814 870 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 CEP83Q9Y592 693 aa13.09□□□□□ -0.31
SMARCA4-211ENST00000586921 A0A1W2PQU0 124 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 GCNT3O95395 438 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 STAU1O95793 577 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 JUNDP17535 347 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 TNNI1P19237 187 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 CCL7P80098 99 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 ME3Q16798 604 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 ZNF284Q2VY69 593 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 FAM46CQ5VWP2 391 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 ESRP1Q6NXG1 681 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 TMPRSS9Q7Z410 1059 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 CBWD2Q8IUF1 395 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SDR16C5Q8N3Y7 309 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 RAD54LQ92698 747 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SYAP1Q96A49 352 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 CCDC74AQ96AQ1 378 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 LMLNQ96KR4 655 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 CPEB1Q9BZB8 566 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 XYLT2Q9H1B5 865 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SLCO3A1Q9UIG8 710 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 KLF15Q9UIH9 416 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 STOML2Q9UJZ1 356 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 INTS6Q9UL03 887 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 UNC13CQ8NB66 2214 aa13.08□□□□□ -0.32
SMARCA4-211ENST00000586921 SPTY2D1-AS1A0A0U1RR47 76 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 NKX2-8O15522 239 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 HNRNPRO43390 633 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 LDLRP01130 860 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 VAV1P15498 845 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 ITGB7P26010 798 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 ATICP31939 592 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 ECT2LQ008S8 904 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 ARHGAP18Q8N392 663 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 FIBINQ8TAL6 211 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 PDCD6IPQ8WUM4 868 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 B3GNT4Q9C0J1 378 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 PDCL3Q9H2J4 239 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 GPR27Q9NS67 375 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 STIM2Q9P246 746 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 SPASTQ9UBP0 616 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 HMGXB4Q9UGU5 601 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 IPO11Q9UI26 975 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 GGT7Q9UJ14 662 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 SARDHQ9UL12 918 aa13.07□□□□□ -0.32
SMARCA4-211ENST00000586921 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 A0A1W2PQM1 296 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 CAPN5O15484 640 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 SLC26A4O43511 780 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 LATS1O95835 1130 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 ANXA6P08133 673 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 TAS2R38P59533 333 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 CDC20Q12834 499 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 EIF2S3LQ2VIR3 472 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 PITRM1Q5JRX3 1037 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 NEK5Q6P3R8 708 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 KYAT3Q6YP21 454 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 HORMAD1Q86X24 394 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 RASSF8Q8NHQ8 419 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 RPL10LQ96L21 214 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 SDCBP2Q9H190 292 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 ANKHD1Q8IWZ3 2542 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-211ENST00000586921 NIPBLQ6KC79 2804 aaeCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms