RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 ZC3H10Q96K80 434 aaKnown RBP16.53■□□□□ 0.24
ATG4D-205ENST00000586477 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
ATG4D-205ENST00000586477 SLC2A11Q9BYW1 496 aa16.53■□□□□ 0.24
ATG4D-205ENST00000586477 ANLNQ9NQW6 1124 aa16.53■□□□□ 0.24
ATG4D-205ENST00000586477 XPO7Q9UIA9 1087 aaKnown RBP16.53■□□□□ 0.24
ATG4D-205ENST00000586477 INVSQ9Y283 1065 aa16.53■□□□□ 0.24
ATG4D-205ENST00000586477 TNRC6BQ9UPQ9 1833 aaKnown RBP16.53■□□□□ 0.24
ATG4D-205ENST00000586477 A0A1W2PQF6 199 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 DRGXA6NNA5 263 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 I6L893 689 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-205ENST00000586477 CES2O00748 559 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 EPN2O95208 641 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 TCP1P17987 556 aaKnown RBP16.52■□□□□ 0.24
ATG4D-205ENST00000586477 BCKDHBP21953 392 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 CASQ1P31415 396 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 SLC6A4P31645 630 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 PTPN7P35236 360 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 ETFBP38117 255 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 MAPKAPK2P49137 400 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 DGKGP49619 791 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 SGSHP51688 502 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 DPYSL3Q14195 570 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 C6orf118Q5T5N4 469 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 TXNRD3NBQ6F5E7 133 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 C17orf53Q8N3J3 647 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-205ENST00000586477 FRMD1Q8N878 549 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 KCNV2Q8TDN2 545 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 KRT35Q92764 455 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 PBKQ96KB5 322 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 KCTD15Q96SI1 283 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-205ENST00000586477 GPATCH2LQ9NWQ4 482 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 CDV3Q9UKY7 258 aaKnown RBP16.52■□□□□ 0.24
ATG4D-205ENST00000586477 SLC27A6Q9Y2P4 619 aa16.52■□□□□ 0.24
ATG4D-205ENST00000586477 MUC22E2RYF6 1773 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CEP192Q8TEP8 1941 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 WASH4PA8MWX3 477 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 KCNK3O14649 394 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 DDX3YO15523 660 aaKnown RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 PRLRP16471 622 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 WASP42768 502 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 ARSEP51690 589 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 ZNF177Q13360 481 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CDH18Q13634 790 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CA9Q16790 459 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 GEN1Q17RS7 908 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 EOGTQ5NDL2 527 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 RFWD3Q6PCD5 774 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 ZNF783Q6ZMS7 281 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 SPOCD1Q6ZMY3 1216 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 NUDT18Q6ZVK8 323 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 BZW1Q7L1Q6 419 aaKnown RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 SETD3Q86TU7 594 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CPNE8Q86YQ8 564 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 PYROXD2Q8N2H3 581 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 RTL3Q8N8U3 475 aaKnown RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 MAIP1Q8WWC4 291 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 TSC1Q92574 1164 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 C16orf45Q96MC5 204 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CSPG4P5Q96PW8 444 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 NAP1L3Q99457 506 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 TLR10Q9BXR5 811 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 TMPRSS4Q9NRS4 437 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 SEMA4GQ9NTN9 838 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 TMEM248Q9NWD8 314 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 PACSIN2Q9UNF0 486 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.51■□□□□ 0.23
ATG4D-205ENST00000586477 GON4LQ3T8J9 2241 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 CKAP5Q14008 2032 aa16.51■□□□□ 0.23
ATG4D-205ENST00000586477 SPTBN2O15020 2390 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 GOLGA6L7A0A1B0GV03 622 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 WASH3PC4AMC7 463 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 H0Y626 953 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 TSPAN3O60637 253 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 TBL1XO60907 577 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 LRP3O75074 770 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 TJP3O95049 919 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 LUC7L3O95232 432 aaKnown RBP16.5■□□□□ 0.23
ATG4D-205ENST00000586477 GOT1P17174 413 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 HOXD9P28356 352 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-205ENST00000586477 CDKN2BP42772 138 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 SLC12A1Q13621 1099 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 E2F5Q15329 346 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 CCDC6Q16204 474 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 ATP13A4Q4VNC1 1196 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 ANKRD20A8PQ5CZ79 823 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 TMEM215Q68D42 235 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 RNF43Q68DV7 783 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 KIAA1211LQ6NV74 962 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 TMCO3Q6UWJ1 677 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 ZNF683Q8IZ20 524 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 ALG3Q92685 438 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 RNF25Q96BH1 459 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-205ENST00000586477 FAF2Q96CS3 445 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 MYEOVQ96EZ4 313 aa16.5■□□□□ 0.23
ATG4D-205ENST00000586477 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms